Gene Information

Name : gspE (ECL_02797)
Accession : YP_003613287.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Virulence
Product : general secretion pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2853999 - 2855477 bp
Length : 1479 bp
Strand : -
Note : -

DNA sequence :
GTGGATGAACTGACGAAACAGCTTTGCACCAGCGGCTTTGCGAAGGAGAACGGCATCCTTTTCTGGAACGACACGGTCTA
TATCCGTGACGACGTCCCCGCGTTTGCGCTACTGGAGATGCGCCGGGTACTGGGGCGTGCCTTTGTGCCCCAGACGCTGA
GCGCGGAAGCGTTTGATGAGATGCTGGCTAAAATCTGGCAGCAGAACAGCGGCGTTTCGCAGCAGCTGGTGGACGATATG
GATGCGGATATCGATCTGATGGCGTTAACCGAGGAGATCCCGGACAACGAAGATCTGCTGGATAACGACGAAAACTCGCC
GGTGATCCGCCTGATCAACGCCATTCTCGGCGAAGCGGTGAAAGACGGTGCATCGGATATCCATATCGAAACCTTTGAGC
GCACGCTGAGCATCCGTTTTCGCGTTGACGGCGTGCTGCGCCCGGTGCTCCAGCCCGCACGTAAACTGGCCCCGCTGCTG
GTCTCGCGTATTAAGGTCATGTCGAAACTCGACATTGCCGAAAAACGACTGCCGCAGGATGGCCGTATCTCCCTGCGCAT
TGGCCGCAAGGCGATTGACGTGCGTGTCTCGACCATTCCGTCGCAGTACGGCGAGCGCGTGGTCATGCGTCTGCTCGACA
AGAGCAACCTGAAACCGGATATCAACAAGCTCGGACTCATTGATGAAGAGCTGGAAAAACTGAAAGGGCTGATTAACCGC
CCGCACGGCATCATCCTGGTCACCGGGCCGACAGGCTCCGGTAAAAGTACCACCCTGTATGCCATTCTGTCGGCCCTGAA
CGGACATGAACGCAACATTCTGACCGTCGAAGATCCGATTGAGTACGAGCTGGAAGGGGTGGGGCAGACGCAGGTCAACC
CGCGCGTGGACATGACCTTTGCCCGCGGCCTGCGCGCCATTTTGCGTCAGGATCCGGACGTGGTGATGATCGGGGAAATT
CGTGACGGTGAAACCGCGCAAATCGCGGTGCAGGCGTCGCTCACCGGTCACCTGGTCATGTCTACGCTGCACACCAACAG
TGCGGCGGGAGCCATCACCCGTCTGCGGGATATGGGGCTGGAGTCCTTTTTAATTGGTTCGTCGCTACTCGGCGTCATTG
CCCAGCGTCTGGTGCGTCGGCTGTGTCCGCACTGCCGTACCACCAGTCCGCTGGATGACAATGAAAAAGCGCTGTTTAGC
TTTATGGATAAGCCACCAAAGGCCATCTATCGCGCCGTTGGTTGCGACCAGTGCCGCCAGAGCGGGTATCAGGGACGCGC
GGGCATTCACGAGTTTCTGGTGGTCGACAGCGCCATGCGTCGCGCCATTCATGAAGACAAAGATGAGATGTCCATTGAGA
CCGAGCTGTTCAAACAGGCCTACAGCCTGCGCGAAAACGGGTTGATGAAGGTCATCAGCGGTATCACGTCCCTTGAAGAG
GTGATGCGCGTGACCGCCGAGCGTGGAGGCGATGAGTAA

Protein sequence :
MDELTKQLCTSGFAKENGILFWNDTVYIRDDVPAFALLEMRRVLGRAFVPQTLSAEAFDEMLAKIWQQNSGVSQQLVDDM
DADIDLMALTEEIPDNEDLLDNDENSPVIRLINAILGEAVKDGASDIHIETFERTLSIRFRVDGVLRPVLQPARKLAPLL
VSRIKVMSKLDIAEKRLPQDGRISLRIGRKAIDVRVSTIPSQYGERVVMRLLDKSNLKPDINKLGLIDEELEKLKGLINR
PHGIILVTGPTGSGKSTTLYAILSALNGHERNILTVEDPIEYELEGVGQTQVNPRVDMTFARGLRAILRQDPDVVMIGEI
RDGETAQIAVQASLTGHLVMSTLHTNSAAGAITRLRDMGLESFLIGSSLLGVIAQRLVRRLCPHCRTTSPLDDNEKALFS
FMDKPPKAIYRAVGCDQCRQSGYQGRAGIHEFLVVDSAMRRAIHEDKDEMSIETELFKQAYSLRENGLMKVISGITSLEE
VMRVTAERGGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-126 57
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-127 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspE YP_003613287.1 general secretion pathway protein E VFG0182 Protein 3e-122 57
gspE YP_003613287.1 general secretion pathway protein E VFG2048 Protein 2e-127 56
gspE YP_003613287.1 general secretion pathway protein E VFG1876 Protein 2e-113 54
gspE YP_003613287.1 general secretion pathway protein E VFG0233 Protein 1e-82 48
gspE YP_003613287.1 general secretion pathway protein E VFG2426 Protein 1e-67 42