Gene Information

Name : gspF (ECL_02796)
Accession : YP_003613286.1
Strain : Enterobacter cloacae ATCC 13047
Genome accession: NC_014121
Putative virulence/resistance : Virulence
Product : general secretion pathway protein F
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 2852791 - 2853999 bp
Length : 1209 bp
Strand : -
Note : -

DNA sequence :
ATGGCTTTCTACGCGTGGACTGCGACCGATGCCGCCGGAAAAACCCAGCGCGGCACGCTGCAGGCGGAAGGACCTAAGCA
GGTGCGCCAGTCGCTGCGTGAGCAGAAGCTGATGCCGCTCACCATCACCGAAACCCGTGAAAATGCGGCCAGCGCTAAAG
CCAAAACCGGCGCCAGACTCTCTGTGCCGGTGCTGTCGATGTTCACCCGTCAGCTGTCAACACTGGTTAACGCGTCGCTG
CCGCTGGAAAGCGCCCTGAAGGCCATTTCAAAGCAGACGGAAGACAAAAAGCTGGCGGCTATGGTGACGGAGATCCGCGA
GAAAGTGGTGGAAGGCCATACGCTGTTTGATGCCTTCAGCCAGTTCCCGCGCACCTTTGACAAGCTGTACTGCACGCTGG
TGATGGCCGGGGAAAAAACCGGCCACCTCGGCGATGTGCTGGAGAAGCTGGCGGAGTACAACGAGCAGCGCCAGAAGATG
AAAAGCAAGCTGACGCAGGCGATGGTCTACCCGATCACCCTGACGGTCGTTGCCGTGGCGGTGATCAGCATCCTGCTGGT
GGCGGTGGTACCGCAGGTCATCGAGCAGTTCGTGCACATGAAACAGCAACTGCCGATCACCACCCGCACGCTGATTGCGG
TGAGCGATTTTCTGCAGGCGTACGGGATCTACATTGCCGGGGGGCTGTTCGGCGCAATCGTGGGCTTTAAGACGTGGGTG
AAGAAAACCACAAACCGCTTTCGCTGGCACAGCTGGCTGGTGAATGGCTCGCCGATTAAAAAGCTGGTTTGCGCCATCAA
TAGCGCCCGCTATATCCGTACGCTCAGCATACTGCAGGCCAGTAGCGTCCCGCTGCTGGAGGGGATGTATATCGCGATGG
ACGGGATCGAAAACCTCTATGCCCGGAAGGTGCTGGAGCAGGCGGCGGATACCGTACGTCAGGGCGCTTCTCTGTATAAC
GCGCTGGACCAGGCGAAGCTCTTTCCGCCGACCATGCTGTACATGATTGCCTCCGGCGAAGAGAGCGGGGAATTAGGTTC
ATTGATGGATCGCGCCGCGGAAAACCAGGAATCGGCATTACAGCATCGAATTACGTTAACGCTGTCGGTATTTGAACCGG
CACTGGTGGTGACAATGGCGACAGTGGTTTTATTTATCGTGCTGTCAATATTACAACCGCTTCTTCAGCTCAATAATATG
GTGGGTTAA

Protein sequence :
MAFYAWTATDAAGKTQRGTLQAEGPKQVRQSLREQKLMPLTITETRENAASAKAKTGARLSVPVLSMFTRQLSTLVNASL
PLESALKAISKQTEDKKLAAMVTEIREKVVEGHTLFDAFSQFPRTFDKLYCTLVMAGEKTGHLGDVLEKLAEYNEQRQKM
KSKLTQAMVYPITLTVVAVAVISILLVAVVPQVIEQFVHMKQQLPITTRTLIAVSDFLQAYGIYIAGGLFGAIVGFKTWV
KKTTNRFRWHSWLVNGSPIKKLVCAINSARYIRTLSILQASSVPLLEGMYIAMDGIENLYARKVLEQAADTVRQGASLYN
ALDQAKLFPPTMLYMIASGEESGELGSLMDRAAENQESALQHRITLTLSVFEPALVVTMATVVLFIVLSILQPLLQLNNM
VG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 2e-78 48
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-78 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspF YP_003613286.1 general secretion pathway protein F VFG2049 Protein 4e-74 46
gspF YP_003613286.1 general secretion pathway protein F VFG0181 Protein 4e-74 43