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Name : mrfC (ECL_01106) Accession : YP_003611616.1 Strain : Enterobacter cloacae ATCC 13047 Genome accession: NC_014121 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1139703 - 1142186 bp Length : 2484 bp Strand : + Note : - DNA sequence : ATGAAAAAAACGATACGGACATTCCGACGCTCAACGCTCAGCGTGCTGATTTTGGCTTTAATCGTGCCGGTGGCGAAAAG CTGGGCCGACGATGATATTCAGTTCAATACCGACGTGCTGGACACGCAGGACAAGAGCAATATCGATCTTAGCCACTTTT CGCGTCGAGGCTACGTCATGCCCGGCGACTACACCTTCAGCATCATGGTGAACAAAGACATCCTGCGCGAAGAGCGAATT GTGGTCTATCCCGAGGGTGAAAACGGCCGGGACAGCCTGATTTGCCTTACGCCAGAGCAGCTCTCTCGCTTCAACCTGAA GGCCAGCGTCATGGACGATCTTCGCTGGCTGCGCGACGGTGAGTGTCTGGACAAAGCCAGTCTCGAAGGGCTGGATATGC GCGTCGACCTTGCAAAGGACACGCTTTATCTGGCGATCCCACAGGCGTGGCTGGAGTACACTGCGCCAAACTGGGATCCG CCTTCGCGCTGGGATGAGGGTATCCCTGGTGTGATTGCCGACTACAACCTCAATGTTCAGGCGCAGCAGAATAAAACCGG TTCAGACAGCCAAAATATCAGCGGGAATGGGGTCCTGGGGGCCAACCTGGGACCATGGCGTGCCCGCGCCGACTGGCAGA CCAGCTGGTACAAGCGTGACGGGAAAACGGACAAGGATTTCGCCTTTAGCCGTTACTACCTCTACCGCGCCATTCCTTCA CTGAAAGCGAAGCTGACGGTGGGGGAAGATTACCTCAGCTCCGATATCTTCGATACCTTCCGCTTTAGCGGCGTTAGCCT GAATTCCGATCTCAGCATGTTGCCGCCGAGCCTGCGTGGCTACGCGCCAGAAGTGACGGGGATCTCCCGTTCAGGCGGTA AAGTGACCATCAGCCAGCAGGGACGCGTAATACACGAAACGCAGGTGGCCGCCGGGGCATTTCGTATTCAGGAACTGAAT GATGCCATCTCTGGCACGCTCGACGTAAGGGTGGAAGAGCTGGACGGCAGCGTGCAGGTCTTTCAGGTCACGACGGCTTC GGTTCCCTACCTGACGCGCCCGGGTGCGGTGCGCTACAAGCTTGCAGCGGGTAAACCCTCCGAGTGGGGGCACAGCATGA TCGGGCCGATGTTCACCTCGGGAGAAATCTCCTGGGGCGTGGCCAACGGCTGGACGCTGTACGGCGGCTCGGTGATCGGC GGTGACTATAATGCCCTGTCGGTGGGGATCGGGCGCGATCTCTTCATCCTCGGCGCGCTGGCCTTCGACGTAACGCAGTC GCGGGCGGTATTGCCTTCTGAAGGAACGCTGTCCGGTACCTCTTACCGGGTGAGCTACTCAAAAACCTTCGACGAGTACG ACAGCCAGGTCACCTTTGCCGGGTATCGTTTCTCCGAACGCGACTTTATGAGTATGTCGGAGTACCTCGATACCCGCTAC GGCAGCGGCACGTCGCACAGCCCGAAAGAAAAATACACGGTGTCGTTTAACAAACGCTTCCGTGATGTCGGGCTGAGCGC TTACCTCAACTACAGCCATCAGACCTACTGGAACAGCGCGGATAACGACCGCGTAAGCCTGTCGCTGTCGCGCTATGTCG AGCTCGGTCCGTTCAAGAACATGAGCGTATCGCTTACGGCCTACCGCAGCGAGTACTACTCCCTGAAAGACGACGGGGCA TACATTTCCGTGTCGTTGCCGATAGGTAACGGCACCTCGCTCAGCTATGGCGCCACAATTAACCGCACCGATAACACACA TCGCGTGAGCTATTACGGCCGGGTGGATGAACACAATAGCTTCCAGGTTAGCAGCGGCCTTTCCCGCAGCGGCCCGACGG CGTACGGCTACTACACCTGGCAGGGCGATAGCGCGCAGGTACAGACCAACGCCAGCTATCAGTCCGGCAGTTATACCGCG CTGGGCATGAATGTGACCGGCGGTCTGACCCTGACCACCGAAGGGGGCGCAGCGCACCGCTCGAACGCGCGGGGCGGCAG CCGCGTACTGGTGGATACCGCAGGCGTCAACGGCGTGCCCGTGAAGGGATTCGGCGCCTCGGTGAAAACCAACCGATTCG GGAAGGCGGTGATTGGCGATGTGAACAGCTACTACCGCAATCCGATCCGCATTGACGTTGACAAGCTTGATGAAAACGCT GACGTCACCCGATCGGTCTCACAGGCCACGCTCACCGAAGGGGCGATCGGCTATCGCCAGTTTGACGTGATTGCAGGTGG TAAAGCGATGGCCTTTATCCGCAAGGCTGACGGGAGCTTCCCGCCATTTGGGGCCTCGGTGATGAACGAGAAAAACCAGG AAACGGGGGTGGTGAATGACGAGGGAAGCGTCTGGCTAAGCGGCATTCAGCCAAACGGCAAAATGACCGTCAAATGGGAT GGACAAGCCCGCTGCGTGGTAAACCTGCCGGCCGTGCTGCCAGCCGTGCTGGAGAATTTGCTTTTAACCTGTGCGCCGGA ATAA Protein sequence : MKKTIRTFRRSTLSVLILALIVPVAKSWADDDIQFNTDVLDTQDKSNIDLSHFSRRGYVMPGDYTFSIMVNKDILREERI VVYPEGENGRDSLICLTPEQLSRFNLKASVMDDLRWLRDGECLDKASLEGLDMRVDLAKDTLYLAIPQAWLEYTAPNWDP PSRWDEGIPGVIADYNLNVQAQQNKTGSDSQNISGNGVLGANLGPWRARADWQTSWYKRDGKTDKDFAFSRYYLYRAIPS LKAKLTVGEDYLSSDIFDTFRFSGVSLNSDLSMLPPSLRGYAPEVTGISRSGGKVTISQQGRVIHETQVAAGAFRIQELN DAISGTLDVRVEELDGSVQVFQVTTASVPYLTRPGAVRYKLAAGKPSEWGHSMIGPMFTSGEISWGVANGWTLYGGSVIG GDYNALSVGIGRDLFILGALAFDVTQSRAVLPSEGTLSGTSYRVSYSKTFDEYDSQVTFAGYRFSERDFMSMSEYLDTRY GSGTSHSPKEKYTVSFNKRFRDVGLSAYLNYSHQTYWNSADNDRVSLSLSRYVELGPFKNMSVSLTAYRSEYYSLKDDGA YISVSLPIGNGTSLSYGATINRTDNTHRVSYYGRVDEHNSFQVSSGLSRSGPTAYGYYTWQGDSAQVQTNASYQSGSYTA LGMNVTGGLTLTTEGGAAHRSNARGGSRVLVDTAGVNGVPVKGFGASVKTNRFGKAVIGDVNSYYRNPIRIDVDKLDENA DVTRSVSQATLTEGAIGYRQFDVIAGGKAMAFIRKADGSFPPFGASVMNEKNQETGVVNDEGSVWLSGIQPNGKMTVKWD GQARCVVNLPAVLPAVLENLLLTCAPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-163 | 45 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 3e-160 | 44 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 2e-159 | 44 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 1e-159 | 44 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 5e-160 | 44 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 5e-160 | 44 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 5e-160 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mrfC | YP_003611616.1 | fimbrial biogenesis outer membrane usher protein | VFG1548 | Protein | 2e-160 | 44 |
| mrfC | YP_003611616.1 | fimbrial biogenesis outer membrane usher protein | VFG0884 | Protein | 2e-160 | 44 |
| mrfC | YP_003611616.1 | fimbrial biogenesis outer membrane usher protein | VFG0895 | Protein | 2e-160 | 44 |
