Gene Information

Name : BC1002_6848 (BC1002_6848)
Accession : YP_003610174.1
Strain :
Genome accession: NC_014120
Putative virulence/resistance : Unknown
Product : IS66 Orf2 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 77999 - 78370 bp
Length : 372 bp
Strand : +
Note : PFAM: IS66 Orf2 family protein; KEGG: bxe:Bxe_A2590 transposase, TnpB

DNA sequence :
ATGATCGGCCTGCCGGCGGGCACGCGTGTCTGGCTCGTTGCCGGCATCACCGACATGCGCTGCGGCGTCCAAGGGCTGTC
GGCGAAGGTGCAGACAGCGCTCAATGAGAATCCACTGGACGGTAACGTCTTCATCTTCCGCGGGCGCCGCGGCGATCTCG
TGAAGGTGCTTTGGGCTACTGAGGACGGACTCTGGCTTCTCGCGAGACGGTTGGAGCGAGGGCGTTTCATCTGGCCACAG
GCCGATGGCGGCAAGATCCATCTGACGAGTGCACAGTTGTCGATGTTGCTCGAGGGCATCGACTGGCGACAGCCACGACG
CACCGCCGCACTCTCGATGTTGCAAACCGCGAGGCATAGAACGGATTCTTGA

Protein sequence :
MIGLPAGTRVWLVAGITDMRCGVQGLSAKVQTALNENPLDGNVFIFRGRRGDLVKVLWATEDGLWLLARRLERGRFIWPQ
ADGGKIHLTSAQLSMLLEGIDWRQPRRTAALSMLQTARHRTDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-34 68
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 6e-26 68
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-34 68
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-34 68
unnamed AAC31493.1 L0014 Not tested LEE Protein 1e-34 68
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-34 68
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 1e-34 68
unnamed AAL99258.1 unknown Not tested LEE Protein 1e-34 68
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 1e-34 68
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 7e-34 68
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 7e-34 68
unnamed AAL08461.1 unknown Not tested SRL Protein 3e-34 67
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-34 67
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-34 67
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-35 67
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 3e-35 67
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 8e-35 66
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 2e-35 64
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 2e-35 64
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 5e-31 64
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 4e-30 59
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 4e-30 59
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 6e-31 59
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 6e-31 59
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 5e-31 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_6848 YP_003610174.1 IS66 Orf2 family protein VFG1709 Protein 6e-35 68
BC1002_6848 YP_003610174.1 IS66 Orf2 family protein VFG0792 Protein 6e-35 68
BC1002_6848 YP_003610174.1 IS66 Orf2 family protein VFG1517 Protein 3e-26 68
BC1002_6848 YP_003610174.1 IS66 Orf2 family protein VFG1698 Protein 5e-35 67
BC1002_6848 YP_003610174.1 IS66 Orf2 family protein VFG1052 Protein 1e-34 67
BC1002_6848 YP_003610174.1 IS66 Orf2 family protein VFG1665 Protein 3e-35 66
BC1002_6848 YP_003610174.1 IS66 Orf2 family protein VFG1737 Protein 2e-31 58