Gene Information

Name : BC1002_6795 (BC1002_6795)
Accession : YP_003610135.1
Strain :
Genome accession: NC_014120
Putative virulence/resistance : Virulence
Product : lytic transglycosylase catalytic
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 22597 - 23034 bp
Length : 438 bp
Strand : -
Note : PFAM: lytic transglycosylase catalytic; KEGG: invasion protein iagB precursor

DNA sequence :
ATGTACGGTGCGCGCATTTCCATTGTTTCCGTGGTCAGCGCGGTGCTGATTGGCTGTGCCTTCGGTGCGCGCGCTGACTG
TCTGGAGGACGCCGCTGCTTACCGTCATATCAGCGCACAACTCGTGCGCGCGATCGCACAGCATGAATCAGGCATGCGGC
CGAACGCAGTGAACGTGAACAGCAACGGGACCGAAGACATCGGCCTCATGCAGATCAACTCATCGTGGCTACCCGTGCTT
GCCCGGTATGGCATTCGCCGGGAGCACCTTTTCAACGCCTGCGTGAACGCCTACGTCGGTACGTGGATTCTGGCCTCGAA
CATCAGACAGTTCGGGCCGACCTGGAAGGCCGTGGGTGCCTATAACGCGGTTTCGACCCAGAAGCAGCTGATCTATGCCA
ACGCAATCTATCGCCGCCTGCAGCGGCAGGGGCAATAA

Protein sequence :
MYGARISIVSVVSAVLIGCAFGARADCLEDAAAYRHISAQLVRAIAQHESGMRPNAVNVNSNGTEDIGLMQINSSWLPVL
ARYGIRREHLFNACVNAYVGTWILASNIRQFGPTWKAVGAYNAVSTQKQLIYANAIYRRLQRQGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 3e-20 47
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 1e-19 47
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 1e-19 47
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 7e-19 47
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-19 46
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 8e-20 46