Gene Information

Name : BC1002_6991 (BC1002_6991)
Accession : YP_003610286.1
Strain :
Genome accession: NC_014120
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 232127 - 232423 bp
Length : 297 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein

DNA sequence : 
ATGACAAGAAGGCGCCGACAGTTTGATGCCAGCTTCAAGCTGGAAGTAGTAAGGATGGTGCGAGACCAGGGGCTATCGGT
CAGCGAAGTGTGCCGGTCGATGGACCTCGTTGAGACAGCCGTGCGCCGCTGGGTGGCGCAGTACGATGCGGAGCGTGCTG
GTGGCCCCGGCGAGGGCAAGCCGCTGACGGCTGAGCAGCAGCGTATCCGGCAGCTCGAGGCGGAAAACCGGCAACTGCGT
GAGGACAACGCGCTGCTAAAAAAAGCATCGGCCTTCTTTGCCCGGGAACTGAAGTGA

Protein sequence : 
MTRRRRQFDASFKLEVVRMVRDQGLSVSEVCRSMDLVETAVRRWVAQYDAERAGGPGEGKPLTAEQQRIRQLEAENRQLR
EDNALLKKASAFFARELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG13 AAN62235.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 8e-29 73
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 6e-17 46
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-12 41
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-12 41
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-12 41
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-12 41
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 4e-12 41
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 4e-12 41
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-12 41
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 3e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_6991 YP_003610286.1 transposase IS3/IS911 family protein VFG1123 Protein 1e-12 41