Gene Information

Name : BC1002_6252 (BC1002_6252)
Accession : YP_003609623.1
Strain :
Genome accession: NC_014119
Putative virulence/resistance : Virulence
Product : type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 716718 - 717200 bp
Length : 483 bp
Strand : -
Note : KEGG: bgl:bglu_2g01440 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796

DNA sequence :

ATGGCGCAAGACATCTTTCTCAAGATTAACGGGATTGATGGTGAGTCGGCGGACGCTAGCCACAAGGACGAAATCGATGT
TCTGAGCTGGGGGTGGGGCGTTACGCAGCAATCGAATATGCACGTTGGTTCCGGCGGCGGCGCCGGCCGAGCAACGGTCG
AAGACTTCACCTTCGAGCATTTCATCGATCGTGCAACGCCCAATCTGACGCAATACTGCCTGACCGGTAAGCACATCGAC
GAAGCGAAGCTGGTCGTGCGTAAGGCCGGGGGTAATCCGCTCGAGTACATCAAATTCACGATGCACGACGTGCTGGTTAC
CTCGGTGCATCCCTCCGGTGTCAGCGACAGCGAATCGCGTCCGCGCGAATCAGTGCGTCTGTCCTTTGCTCGTCTGAAGC
AGGAGTATGTGGTGCAGAACGCGCAAGGCGGTAGCGGTGGTGCGATCACGGCGACCTTCGATATCAAGAAGAACACAGCC
TAA

Protein sequence :

MAQDIFLKINGIDGESADASHKDEIDVLSWGWGVTQQSNMHVGSGGGAGRATVEDFTFEHFIDRATPNLTQYCLTGKHID
EAKLVVRKAGGNPLEYIKFTMHDVLVTSVHPSGVSDSESRPRESVRLSFARLKQEYVVQNAQGGSGGAITATFDIKKNTA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	8e-47	63

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
BC1002_6252	YP_003609623.1	type VI secretion system effector	VFG2071	Protein	1e-25	46