Gene Information

Name : BC1002_6197 (BC1002_6197)
Accession : YP_003609570.1
Strain :
Genome accession: NC_014119
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 652366 - 653832 bp
Length : 1467 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: bam:Bamb_5214 betaine-aldehyde dehydrogenase

DNA sequence :
ATGCAAACCCAACTGTTCATCGACGGCCGCTTCACGGACGCCGTCGAAGGCGGCACGATCGACGTGCTCAATCCGCACGA
CGGCTCGCTGATCACGCAGATCGCCGCGGCCACCGCCGCCGATGTCGATCTGGCCGTCGACGCCGCCGCGCGCGCGTTCC
CGAAGTGGGCCGCGCTGCCCGCCGCCGAACGCGGCCGGCTGCTGCTGAAGCTCGCCGACGCGATCGAGGCCAACGCGGAA
CAACTCGCGCAACTCGAATCGCTGGACACCGGCCACCCGATCCGCGATTCGCGATCGCTCGACGTGCCACGCACGGCGGC
ATGCTTTCGCTACTTCGGCGGCATGGCCGACAAGCTGCAAGGCTCGGTGATTCCGGTGGAAGCGGGCTTTCTGAACTACG
TGCAGCGCGCGCCGATCGGCGTGGTCGGGCAGATCGTGCCGTGGAATTTCCCGCTGATGTTCACGAGCTGGAAGATGGGA
CCGGCGCTCGCGGCCGGCAACACGGTCGTGCTGAAGCCTTCGGAGATCACGCCGCTGTCCACGCTGCGCATCGTCGAGCT
GATGGCCGAGGTGGGCTTTCCTGACGGCGTCGTCAACATCGTCGCGGGCTATGGTCATACGGCGGGGCAGCGGCTCGCCG
AGCATCCGGGTGTCGGCAAGATCGCGTTCACCGGATCGACCGCGACCGGCCGGCGCATCGTCGAGGCCTCGCAGGGCAAC
CTGAAGCGTGTGCAGCTCGAACTCGGCGGCAAGGGCGCGAACATCGTGTTCGATGACGCGAACCTCGACGCCGCGATCAA
CGGCGCCGCCTGGGCGATTTTCCACAACCAGGGCCAGGCGTGCATCGCGGGCTCGCGGCTGATCCTGCACGAGCGCATCG
CCGATCAGTTCCTCGAGCGCTTCGTGTCGCTGGCGGCGTCGATCCGGCTCGGCAATCCGCTCGATGCCGACACCGAGATG
GGGCCGCTCACGTCGAAGCAGCATCAGGAACGCGTGCTCGCGTTCGTCGACATCGCGCGCCAGCAGGGCGGCCGCGTGCT
GACCGGCGGCACTGCACCGAGCGATGCATCACTTGCGAACGGCTACTACGTGCGCCCGACCGTCGTCGAGGCCGCGAGTC
CGAACGACCGCGTCGCGCAGGAGGAAGTGTTCGGCCCGTTCGTCACGGTGCTGCGTTTCCGTACCGACGACGAAGCGCTC
GCGATCGCCAACGGCACCGACTACGGCCTCGGCAGCGGGCTGTGGACGCGCGATCTGTCGCGCGCGCATTCGATGGCCGC
GCGGATTCATGCGGGCATGTGCTGGGTCAACTGCTACAAGCGCGTCAATCCGGGTAGCCCGTTCGGCGGCGTCGGACAGT
CGGGCTACGGCCGTGAGATGGGCTTCGAGGCGATGCACGACTACACGGAAGCGCGCTCGGTGTGGGTTAACGTCGACGGC
AACGTGCCGCCGCATTTCAAACGCTGA

Protein sequence :
MQTQLFIDGRFTDAVEGGTIDVLNPHDGSLITQIAAATAADVDLAVDAAARAFPKWAALPAAERGRLLLKLADAIEANAE
QLAQLESLDTGHPIRDSRSLDVPRTAACFRYFGGMADKLQGSVIPVEAGFLNYVQRAPIGVVGQIVPWNFPLMFTSWKMG
PALAAGNTVVLKPSEITPLSTLRIVELMAEVGFPDGVVNIVAGYGHTAGQRLAEHPGVGKIAFTGSTATGRRIVEASQGN
LKRVQLELGGKGANIVFDDANLDAAINGAAWAIFHNQGQACIAGSRLILHERIADQFLERFVSLAASIRLGNPLDADTEM
GPLTSKQHQERVLAFVDIARQQGGRVLTGGTAPSDASLANGYYVRPTVVEAASPNDRVAQEEVFGPFVTVLRFRTDDEAL
AIANGTDYGLGSGLWTRDLSRAHSMAARIHAGMCWVNCYKRVNPGSPFGGVGQSGYGREMGFEAMHDYTEARSVWVNVDG
NVPPHFKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-84 44
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-87 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-83 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-83 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-83 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-83 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-83 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-83 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_6197 YP_003609570.1 aldehyde dehydrogenase VFG0082 Protein 2e-83 42