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Name : BC1002_6087 (BC1002_6087) Accession : YP_003609464.1 Strain : Genome accession: NC_014119 Putative virulence/resistance : Virulence Product : lytic transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 541298 - 541789 bp Length : 492 bp Strand : + Note : PFAM: lytic transglycosylase catalytic; KEGG: rpi:Rpic_3138 lytic transglycosylase catalytic DNA sequence : ATGGACCAGCACAAGACCAACGCCTTCGGCCCTTTGCGGTCGTGGGCCATCTGCGCCTGGGCGGCGCTGGTGGTCCTCGG CAGTTCGGGCGCGCAGGCCGCCCCGACCGCCGATGACTGCTTCGACAAGGCCGGCGCCTACCAGGGTGTCAATCCGCACG TACTGCGCGCCGTGGCATGGCGCGAATCGAAAGGCGACGCGACCGCCATCAACCGCAACGCCAACGGTTCGATCGACGTG GGCCAATTGCAGATCAATTCGATCCACTTTCCGGAACTCGCGAGCCAGGGCATTCCGCACCGCGCGCTCACGGACCCGTG CGTGAATATCTTCGTGGCCGCCTGGCTGCTCAAGCAGAAGATGGTGCGCCACGGCAACACATGGCGCGCCATCGGCGCGT ATCACTCGGAATCGCCGCGTGAACGTGACGCCTACGCGCGCAGCATCCAGGCGATTCTCGTCAGCTGGGGGCTGTTGCAG CGGGAGCGGTGA Protein sequence : MDQHKTNAFGPLRSWAICAWAALVVLGSSGAQAAPTADDCFDKAGAYQGVNPHVLRAVAWRESKGDATAINRNANGSIDV GQLQINSIHFPELASQGIPHRALTDPCVNIFVAAWLLKQKMVRHGNTWRAIGAYHSESPRERDAYARSIQAILVSWGLLQ RER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3001 | YP_244069.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 5e-31 | 58 |
| hpa2 | NP_636615.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 5e-31 | 58 |
| hpa2 | NP_640772.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 5e-30 | 55 |
| hpaH | YP_362172.1 | transglycosylase HpaH | Virulence | Hrp PAI | Protein | 3e-30 | 55 |
| hpaH | AAL78295.1 | HpaH precursor | Virulence | Hrp PAI | Protein | 2e-30 | 55 |
| hpa2 | AAF61278.1 | Hpa2 precursor | Virulence | Hrp PAI | Protein | 1e-29 | 55 |
