Gene Information

Name : BC1002_5975 (BC1002_5975)
Accession : YP_003609357.1
Strain :
Genome accession: NC_014119
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 428372 - 428773 bp
Length : 402 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_7044 transposase IS3/IS911 family protein

DNA sequence :
GTGCCTAACAGTAAGCCTAGTCATTACGTGGAACCCATCGAAATTCTGAGTGAGCCGGAGCGCCGTCGGCGGCGCACGGC
GCAGGAAAAAATCGCCATCGTCCAGGAGACGCTGATATCTGGCGCATCGGTATCAGCCGTTGCCCGGCGGCATGGCGTGA
ACCCGAACCAAGTGTTCGGCTGGCGCAAGCAATACCAGGAAGGCAGTCTGGCGGCAGTGAAAGCGGGCGAGACCGTCGTG
CCGGCATCAGAGCTCGCCGCAGCCATCAAGGAAATCAAGGAACTGCAACGACTACTCGGGAAGAAGACGATGGAAGTCGA
AATCCTGAAGGAAGCCGTGGAATGGGGCCGCTCAAAAAACCTGATTGCGCGCTCGCCCTTGCTGCCGGGGGACGACCATT
GA

Protein sequence :
MPNSKPSHYVEPIEILSEPERRRRRTAQEKIAIVQETLISGASVSAVARRHGVNPNQVFGWRKQYQEGSLAAVKAGETVV
PASELAAAIKEIKELQRLLGKKTMEVEILKEAVEWGRSKNLIARSPLLPGDDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 7e-36 72
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 7e-36 72
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 5e-36 72
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 5e-36 72
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 7e-36 72
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 5e-36 72
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-35 71
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 3e-36 71
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 9e-36 70
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 9e-36 70
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 5e-36 70
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 5e-27 66
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 1e-26 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_5975 YP_003609357.1 transposase IS3/IS911 family protein VFG0648 Protein 9e-37 71
BC1002_5975 YP_003609357.1 transposase IS3/IS911 family protein VFG0622 Protein 3e-36 70
BC1002_5975 YP_003609357.1 transposase IS3/IS911 family protein VFG0609 Protein 3e-36 70
BC1002_5975 YP_003609357.1 transposase IS3/IS911 family protein VFG1733 Protein 4e-27 65