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Name : BC1002_3987 (BC1002_3987) Accession : YP_003607506.1 Strain : Genome accession: NC_014118 Putative virulence/resistance : Unknown Product : Fis family proprionate catabolism activator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 867222 - 869243 bp Length : 2022 bp Strand : - Note : TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain protein; helix-turn-helix Fis-type; KEGG: bpy:Bphyt_5404 proprionate catabolism activator, f DNA sequence : GTGTCCACGTTCGCCCCGTTCGTCGCGAACCCGAGCCCCGCCGTTGATATCGGCCGCCCGGGCGTCGCACTCGTCAGTAT TAGCCGACTGCAATCGCTTTGCGAGGCGGTCGCGCCGCGCTATGCCGGCCGCGCGAAATTCTTCACGGTGCGGGAGGGCT ACGGCGCGGCCGTCGCCGCGCTGCAGGCGTACGTGGATGCGGGTTCCGTCGACGTCGTACTGTCCGCCGGCTCGAACGGC GCGTACCTGCGGGAGAACCTCGGCGTGCCGGTCGTGATGGTCAAGGTGAACGGCTTCGACGTGTTGAGCGCGATCACGCG CGCCACCGCCACCTGGCCGCAGGCGCGCATCGGGCTCGTGCTGCATGAAGCGATCGCGCAGGAACTGGCCGACCTGAGCC CGCTGCTGAACGTCGATCTGCGGCAGCGCGCGTACCGGTCGATCGACGAAGTGCGGCACGCGGTCGATGAACTCGCCGCG CAGGGGTGCCGCGTGGTGGTCGGCGCGGGCATGGCCTGCGATCTGGCGCAGCAGGCCGGCATGGAAAGCGTGTTCCTGTA CTCGCTCGCCGCGGTCGAGGAAGCGTTCGAGCGCTCGGTCGAACTGGCGCGCGTGAGCCGGCAGAAGGAATCGAAGCGAG TGCGCCTGAATACGATCGTCGCGCATCTGCGCGACGGCGTCGCCGCGTTCGACGAAGCCGGCCAGCTCGAAGCCGTCAAC CCGGCGATGCTCGACCTGCTCGGTTTAGGCCCGGCGCAGGAGGCCCCGAAGGACGACGAGGACACTCCCGCGCGCGTCGG GCGCGCGCTGGCACCGCTGTTGCGCGAGACGCGCGCCGCCGACCAGCCAGTCGACGAACGCGTCGAGCAGATCGGCGGGC GCGCGCTGATCGTCAGCTGTGTGCCGATCGTCGAGCAGGGCGCGCGGGCCGGTTTCGTCGTGACGGCGCAGGACGCGCTC GTTGCGCAACGGATCGACCGCTCGCTGCGCACCAGCCAGCGGCCGAGGCATCTGGTCGCGCGGCACCGGCTCGACGACCT GATCGGCGCCTCGATGGCGCTCGAACGCGTGCGCCGTCTCGCGCGCGCCGGCGCCGCGCACGACGCCACCGTGCTGCTGA GCGGCGAAAGCGGCACAGGCAAGGAGTTGGTCGCGCAGGGCATCCATAACGCGAGCCGGCGGCGCGGCAATCCGTTCGTC GCATTCAACTGCGCGGCGCTGCCCGAAGGGCTGATCGAAAGCGAGCTGTTCGGGCACGAGGAAGGGGCGTTCACGGGTGC CCGACGCGGCGGCAAGCCGGGGTTATTTGAAATCGCGCACACCGGCACCATCTTTCTCGATGAAATCGGCGAAATGCCGG CCGCGCTGCAAAGCCGGCTATTGCGGGTGCTGCAGGAACGCGAGGTGATGAAGCTCGGCGCGGGCCGCGCGACGCCGGTC GATGTGCGTGTGATCGCCGCGACGCATCGCGATCTGCACGCGCTCGTCGAGCAGGGCGCGTTTCGCGCGGATCTGTATTT CAGATTAAATCTGCTTCAGATAAAATTGCCGCCGCTGCGCGAACGCCGCGCCGACATCGCGCCGCTGGCGCGGCATCTGC TGGAGCGCAGCGCGCTGCAGTACGGCTTGTCGGCGGCGGCGCTCGAGCGGGTGCTCGCGTTTCTCGACCCGCTTTTCGCG AACTACGCGTGGCCCGGCAACGTCCGCGAACTGGAAAATCTGCTGGCGCGCGCGGCGATTTATATCGGTGACGCGGCCAG CGAGATGTCCGGGAACTCGACCGCCGACGCCTTGCCAGACTGGTTGGCGGTGTTTCCCGAGTTCGGCCGGGTCAGGCTGG CCGGGGGCGAGCGAATCAAAGAAGCGTCCCAGCACGCTAACCCTGGCGGCACGGCGCCCCGCGTCAGCCCCAGCCGCGAG GATGCGCTGCGTGCCCTCGAACAATCCGGCGGCAATCGTGCCGCCGCGAGCCGCGCGCTCGGCATCGGTCGAACCACGCT GTGGCGGCTTCTGAAGGGCTGA Protein sequence : MSTFAPFVANPSPAVDIGRPGVALVSISRLQSLCEAVAPRYAGRAKFFTVREGYGAAVAALQAYVDAGSVDVVLSAGSNG AYLRENLGVPVVMVKVNGFDVLSAITRATATWPQARIGLVLHEAIAQELADLSPLLNVDLRQRAYRSIDEVRHAVDELAA QGCRVVVGAGMACDLAQQAGMESVFLYSLAAVEEAFERSVELARVSRQKESKRVRLNTIVAHLRDGVAAFDEAGQLEAVN PAMLDLLGLGPAQEAPKDDEDTPARVGRALAPLLRETRAADQPVDERVEQIGGRALIVSCVPIVEQGARAGFVVTAQDAL VAQRIDRSLRTSQRPRHLVARHRLDDLIGASMALERVRRLARAGAAHDATVLLSGESGTGKELVAQGIHNASRRRGNPFV AFNCAALPEGLIESELFGHEEGAFTGARRGGKPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGAGRATPV DVRVIAATHRDLHALVEQGAFRADLYFRLNLLQIKLPPLRERRADIAPLARHLLERSALQYGLSAAALERVLAFLDPLFA NYAWPGNVRELENLLARAAIYIGDAASEMSGNSTADALPDWLAVFPEFGRVRLAGGERIKEASQHANPGGTAPRVSPSRE DALRALEQSGGNRAAASRALGIGRTTLWRLLKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 6e-99 | 41 |
