Gene Information

Name : BC1002_3983 (BC1002_3983)
Accession : YP_003607502.1
Strain :
Genome accession: NC_014118
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 863252 - 864088 bp
Length : 837 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: bcj:BCAS0033 transposase

DNA sequence :
GTGGCCGGGTTAAGGCATCAGTTTCCAGTAGACGGCCTGCTGAAGGTGGCGGGCCTGGCGCGCAGCACTTTCTACTATCA
GTGCAAGGCATCGCTGGTGGCGGACAAACACGCGCAACTCAAGGCGCGTATCCGCTCGTTATTCGAGCAGCACAAGGGAC
GGTATGGCTATCGGCGCATCACCAGCGCGATCCGGCGCCTGGGTATCGTTGTCAATCACAAGACTGTCCAGCGACTGATG
CAGCTCATGAAGCTGAAGTGCCTGGTGCGTCCGAAGAAGTACCGCGCCTTCCGGGGGACGGTGGGACGGATTGCGCCGAA
CGTGCTGCAAAGAGAGTTTGACGCCGATGCGCCAAACCGGAAGTGGGTCACCGATATCACCGAGTTCCGGGTGGGCGAGC
ACAAGCTCTATCTGTCGCCCGTTCTGGATCTGTATAACGGCGAGATTGTGGCTTACGAGACGGCCACACGTCCGGCGTTT
GCAATGGTCGCAGGCATGATCAGGAAGGCCATGAGGAAGCTGAAGCCTGACGATCGGCCCGTGGTCCACTCCGATCAGGG
CTGGCACTATCAGATGAGTGCTTACCAGACGTTGCTCGCCCGGCGCGGCCTGACACAGAGCATGTCGCGCAAGGGAAACT
GCCACGATAACGCCACGATGGAGAGCTTCTTCGGCACGCTGAAGTCAGAGTTCTTCCACCTGAATCGCTTCGAGAGCATT
GAAGCACTTCAGGCCGGCATCAAAGACTACATTCACTACTACAATCACCAACGCATCAAGCTGAAACTAAAAGGGCTGAG
TCCTGTGATGTACAGAACCCAGCCCTCACGGCCCTAG

Protein sequence :
MAGLRHQFPVDGLLKVAGLARSTFYYQCKASLVADKHAQLKARIRSLFEQHKGRYGYRRITSAIRRLGIVVNHKTVQRLM
QLMKLKCLVRPKKYRAFRGTVGRIAPNVLQREFDADAPNRKWVTDITEFRVGEHKLYLSPVLDLYNGEIVAYETATRPAF
AMVAGMIRKAMRKLKPDDRPVVHSDQGWHYQMSAYQTLLARRGLTQSMSRKGNCHDNATMESFFGTLKSEFFHLNRFESI
EALQAGIKDYIHYYNHQRIKLKLKGLSPVMYRTQPSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 2e-77 53
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 1e-70 50
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 2e-58 49
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 2e-58 48
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-51 46
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 4e-52 46