Gene Information

Name : BC1002_3806 (BC1002_3806)
Accession : YP_003607335.1
Strain :
Genome accession: NC_014118
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 676768 - 677502 bp
Length : 735 bp
Strand : -
Note : KEGG: bpy:Bphyt_5007 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence :
ATGACGCTTCGTGACCACGACGTCGTACCCGCACTCGAATGCCGCGGCCTCAGCAAGCGGTACGGCACCGGCCGCATCGT
GCTCGCGAAGCTCGACTTCACACTTGCTGCGGGCGAGTTCGTCGCGATCATGGGCGACTCGGGCGTCGGCAAGTCGACGT
TGCTCAACCTGATCGCCGGACTCGACCGCGCCGATAGCGGCAGTGTGCTGATCGACGGACGGGCGGTCGAGCAGCTCGAC
GACAACGCCGCGACGCGTCTGCGCCGCCAGAAGCTCGGCTTCGTATTCCAGGCGTTTCATGTGCTGCCGCATCTGACGCT
CGCGCAGAACGTCGCGCTGCCACTGCTGCTCAATCATCTACCGACGGCCGCCGCGCTCGACATGCTCGCGGCGGTCGGCC
TCGGCGGACGCGGCGACGACTTCCCACGAGATCTCTCCGGTGGCGAGTTGCAGCGGGTAGCCATTGCACGCGCACTCGTG
CATCGTCCGTCGCTGCTTCTCGCCGACGAACCGACAGGCAACCTGGACCCCGCCACCGCGCACGACGTGCTTGGCCTGTT
CCGCGCGCAAAGCAAGGCGACCGGCGCGGCGACGATCATGGTCACGCATTCGGAAGCCGCGGCAGCCGTTGCCGACCGCG
TGTTGGTCCTGAGCGACGGCGGCTTGCATGCCGCGCGCAATAAACCCGCGAACGTCGCGCACGCCGCGGCCCGCTCGACC
GACGATGGCCGCTGA

Protein sequence :
MTLRDHDVVPALECRGLSKRYGTGRIVLAKLDFTLAAGEFVAIMGDSGVGKSTLLNLIAGLDRADSGSVLIDGRAVEQLD
DNAATRLRRQKLGFVFQAFHVLPHLTLAQNVALPLLLNHLPTAAALDMLAAVGLGGRGDDFPRDLSGGELQRVAIARALV
HRPSLLLADEPTGNLDPATAHDVLGLFRAQSKATGAATIMVTHSEAAAAVADRVLVLSDGGLHAARNKPANVAHAAARST
DDGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-29 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_3806 YP_003607335.1 ABC transporter NC_008702.1.4606598. Protein 1e-32 48
BC1002_3806 YP_003607335.1 ABC transporter CP001581.1.gene798.p Protein 7e-42 44
BC1002_3806 YP_003607335.1 ABC transporter NC_012469.1.7686878. Protein 1e-33 44
BC1002_3806 YP_003607335.1 ABC transporter NC_012469.1.7685735. Protein 6e-34 43