Gene Information

Name : BC1002_5410 (BC1002_5410)
Accession : YP_003608851.1
Strain :
Genome accession: NC_014118
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2415771 - 2416448 bp
Length : 678 bp
Strand : +
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator; KEGG: bpy:Bphyt_5224 two component heavy metal response transcriptional regulator, winged helix family; SMART: response regulator receiver

DNA sequence :
ATGCGAATTCTCGTAATTGAAGACGAGGCGAAAACTAGCGCCTATCTGAAGAAGGGCCTGGAGGAATCCGGCTATACGGT
CGACATTGCCGCGGACGGCGCGGAAGGCCTGATTCTCGCGAAGGAATCGGAGTACGACGTGATCGTGCTCGATGTGATGC
TGCCTTCCATCGATGGGTGGACGGTGCTCAAGACACTACGCGCCACGCAAACCACGCCTGTGCTGTTCCTCACAGCGCGC
GACGACGTAAGCGACAGAGTAAAGGGCCTGGAGCTGGGCGCCGATGACTACCTCGTGAAGCCGTTCGCGTTCGTCGAACT
GCTCGCGCGAGTGCGCACTCTCGCAAGACGCGGTCCACCGCGAGAGAACGACGTGCTGACGCTCGGGGATCTCGAAGTCG
ACGTTACGCGCCGGCGGGTGAAGCGCGGCGGCAAGCGCATCGACCTCACGCCGAAGGAGTTCTCACTGCTGCAACTGCTG
GTGCGCCGCCAGGGCGAAGTGCTTACGCGCACGCAGATTGCCTCGTACGTGTGGGACATGAACTTCGATAGCGACACAAA
CGTGGTGGAAGTGGCCATTCGCCGCCTGCGCGGCAAAGTGGACGACGACTTTCCTGTCAAGCTGATCCACACGGTGCGCG
GCGTGGGCTACGTGGCCGAAAGCAGAGAGCCCGCCTGA

Protein sequence :
MRILVIEDEAKTSAYLKKGLEESGYTVDIAADGAEGLILAKESEYDVIVLDVMLPSIDGWTVLKTLRATQTTPVLFLTAR
DDVSDRVKGLELGADDYLVKPFAFVELLARVRTLARRGPPRENDVLTLGDLEVDVTRRRVKRGGKRIDLTPKEFSLLQLL
VRRQGEVLTRTQIASYVWDMNFDSDTNVVEVAIRRLRGKVDDDFPVKLIHTVRGVGYVAESREPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-55 59
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-54 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_5410 YP_003608851.1 transcriptional regulator BAC0125 Protein 3e-67 66
BC1002_5410 YP_003608851.1 transcriptional regulator BAC0197 Protein 5e-67 65
BC1002_5410 YP_003608851.1 transcriptional regulator BAC0083 Protein 5e-63 63
BC1002_5410 YP_003608851.1 transcriptional regulator BAC0638 Protein 3e-54 62
BC1002_5410 YP_003608851.1 transcriptional regulator BAC0308 Protein 2e-61 61
BC1002_5410 YP_003608851.1 transcriptional regulator BAC0111 Protein 4e-59 57
BC1002_5410 YP_003608851.1 transcriptional regulator BAC0347 Protein 7e-55 54
BC1002_5410 YP_003608851.1 transcriptional regulator NC_010079.5776364.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_002952.2859858.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_007622.3794948.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_003923.1003417.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_013450.8614146.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_002951.3238224.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_007793.3914065.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_002758.1121390.p0 Protein 1e-37 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_003923.1003749.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_007622.3794472.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-34 44
BC1002_5410 YP_003608851.1 transcriptional regulator AE015929.1.gene1106. Protein 5e-32 43
BC1002_5410 YP_003608851.1 transcriptional regulator AE000516.2.gene3505. Protein 8e-28 42
BC1002_5410 YP_003608851.1 transcriptional regulator HE999704.1.gene1528. Protein 9e-28 41
BC1002_5410 YP_003608851.1 transcriptional regulator NC_012469.1.7685629. Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_5410 YP_003608851.1 transcriptional regulator VFG0596 Protein 2e-55 59
BC1002_5410 YP_003608851.1 transcriptional regulator VFG1389 Protein 9e-36 48
BC1002_5410 YP_003608851.1 transcriptional regulator VFG1390 Protein 7e-39 47
BC1002_5410 YP_003608851.1 transcriptional regulator VFG1386 Protein 3e-35 42