Gene Information

Name : BC1002_0923 (BC1002_0923)
Accession : YP_003604529.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1023855 - 1024553 bp
Length : 699 bp
Strand : +
Note : KEGG: bxe:Bxe_A3248 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGAGTGACCTGAGCATTACCGTCGTTCTGATCGAAGACGAAAAGCAGATTCGCCGCTTCGTGCGCACGGCGCTCGAAGG
CGAGGGAATCGCCGTGTACGACGCCGAGACCGGCAAGCAAGGGCTCGTCGAAGCGGCGACGCGCAAGCCCGATCTGGTGA
TCGTCGATCTGGGCCTGCCCGACACCGACGGCCTCGACGTGATCCGCGAGCTGCGCGGCTGGAGCGAGCTGCCGGTGATC
GTGCTGTCGGCGCGCACCCAGGAAAGCGAAAAGGTCGCCGCGCTCGACGCCGGCGCCGACGACTACCTGACCAAGCCGTT
CGGCGTGTCCGAGTTGCTCGCGCGGATTCGCGCGCATCTGCGGCGGCGCAATCACGGCGGCGCGAACGAATCGCCGCAGG
TGCGCTTCGGCGCGGTCACCGTCGACCTCGCGTTGCGCCAGGTCACGCGCGACGGCGCCGCGATCCATCTGACGCCGATC
GAATACCGGCTGCTCGCGACGCTCGTGCGCCACGCCGGCCGCGTGCTCACGCACCGGCAGTTGCTGCGCGACGTGTGGGG
GCCGTCGCATGTCGAGAGTCACCACTATTTGCGCATCTACATGGCACACCTGCGCGGCAAGCTCGAGCGCGATCCGGCGC
AGCCGGAGCATATCGTCACGGAGACGGGCGTCGGGTATCGGCTGGTGGGCGCGGCGTGA

Protein sequence : 
MSDLSITVVLIEDEKQIRRFVRTALEGEGIAVYDAETGKQGLVEAATRKPDLVIVDLGLPDTDGLDVIRELRGWSELPVI
VLSARTQESEKVAALDAGADDYLTKPFGVSELLARIRAHLRRRNHGGANESPQVRFGAVTVDLALRQVTRDGAAIHLTPI
EYRLLATLVRHAGRVLTHRQLLRDVWGPSHVESHHYLRIYMAHLRGKLERDPAQPEHIVTETGVGYRLVGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 7e-30 41
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-35 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_0923 YP_003604529.1 two component transcriptional regulator, winged helix family VFG1390 Protein 7e-31 43