Gene Information

Name : BC1002_0008 (BC1002_0008)
Accession : YP_003603632.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Resistance
Product : transcriptional regulator, MerR family
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 11934 - 12365 bp
Length : 432 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: bpy:Bphyt_0028 transcriptional regulator, MerR family; SMART: regulatory protein MerR

DNA sequence : 
ATGAAAATCGGCGAACTGGCGAAAATCGCCCATTGCACGACGGAAACCATCCGTTTCTACGAGAAAGAGCGCCTGCTGCC
CGAGGCGGAGCGCACCGAGGCCAATTACCGCAGTTACACGGCAAAGCATGTCGAGCGCCTGCGTTTCATCCGCAATTGCC
GCGCGCTCGACATGACCCACGACGAAATCCGCGCCTTGCTGCGTCTGACCGACGCGCCGGCGAACGGCTGCGGCGGCATG
CATGCGCTGATAGACGAGCACGTCGCGCACGTCGACACGCGTATCGAAGAACTGCAGCAGCTGAAGGCGCAACTGACAAC
GCTGCGTGACCAATGCCACGGCGAGCATCCGGTCGAAGACTGCGGCATCGTGCACGGCCTGACCGACATGGATGTGGCCG
TGCCGCGTCCGCGGCATACGCATCTCGGCTGA

Protein sequence : 
MKIGELAKIAHCTTETIRFYEKERLLPEAERTEANYRSYTAKHVERLRFIRNCRALDMTHDEIRALLRLTDAPANGCGGM
HALIDEHVAHVDTRIEELQQLKAQLTTLRDQCHGEHPVEDCGIVHGLTDMDVAVPRPRHTHLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 9e-32 51
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-31 48
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-31 48
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-31 48
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-31 48
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 6e-31 47
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 4e-31 47
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 3e-31 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_0008 YP_003603632.1 transcriptional regulator, MerR family BAC0301 Protein 2e-33 60
BC1002_0008 YP_003603632.1 transcriptional regulator, MerR family BAC0058 Protein 7e-40 56