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Name : BC1002_0737 (BC1002_0737) Accession : YP_003604345.1 Strain : Genome accession: NC_014117 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 809720 - 812005 bp Length : 2286 bp Strand : + Note : KEGG: bxe:Bxe_A3477 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein DNA sequence : ATGAAGTTCCGTTTTCCCGTCGTCATCATCGACGAAGATTTCCGCTCCGAGAACATCTCGGGTTCCGGCATCCGGGCTTT GGCCGAAGCCATCGAGAAAGAAGGCGCGGAAGTGCTCGGGTTGACGAGCTACGGCGATCTGACCTCGTTCGCGCAGCAGT CGAGCCGCGCGTCATGCTTCATCCTGTCGATCGACGACGACGAACTGCTGCCGTACGTCGACAACGTGGTCGTCGAAGGC GAGACACCCGAGCTTGCGGCCGCGATCGTCGCGCTGCGCGCGTTCGTGACCGAAGTGCGCCGCCGCAACGCCGATATCCC GATCTTCCTGTACGGCGAGACGCGCACCTCGCGCCATCTGCCGAACGACATCCTGCGCGAACTGCACGGCTTCATCCACA TGTTCGAGGACACGCCGGAGTTCGTCGCGCGTCATATCATCCGCGAGGCGAAGGTGTACCTGGATTCGCTCGCACCGCCG TTCTTCAAGGAACTGGTGCAGTACGCGGAAGAGGGTTCGTACTCGTGGCACTGCCCGGGCCACTCGGGCGGCGTCGCGTT CCTGAAGAGCCCGCTCGGCCAGATGTTCCACCAGTTCTTCGGCGAGAACATGCTGCGCGCCGACGTCTGCAACGCGGTCG ACGAACTCGGCCAGCTGCTCGACCACACCGGTCCGGTCGCGGCCTCGGAGCGCAACGCCGCGCGCATCTTCAGCGCCGAT CACGTGTTCTTCGTGACCAACGGCACCTCCACGTCGAACAAGATCGTCTGGCACGGCACGGTTGCGCCGGGCGACATCGT GCTGGTCGACCGCAACTGCCACAAGTCGATCCTGCACGCGATCACGATGACCGGCGCGATCCCGGTGTTCCTGACGCCGA CCCGCAACAACTTCGGCATCATCGGTCCGATCCCGCGCAGCGAGTTCGAACCGGAGAACATCCGCAAGAAGATCGAGGCG AACCCGTTCGCGCGCGAAGCGCTCGCGAAGAACCCGAACCTGAAGCCACGCATCCTGACCATCACGCAAAGCACCTATGA CGGCGTGGTCTACAACGTCGAGATGATCAAGGAGATGTTGGGCGAATGGCTCGACACGCTGCACTTCGACGAAGCATGGC TGCCGCACGCCGAATTCCACGAGTTCTATCAGGACATGCACGCGATCGGCGCGGGCCGTCCGCGCATCGGCGCGATGATC TACGCGACGCACTCCACGCACAAGCTGCTCGCCGGCATCTCGCAGGCGTCGCAGATCGTCGTGCAGGATTCGAAGAACAG CCGCTTCGACAAGCATCGCTTCAACGAGGCCTATCTGATGCATACGTCGACGAGCCCGCAGTACGCGATCATCGCGTCGT GCGACGTGGCCGCGGCGATGATGGAAGCGCCGGGCGGCACCGCGCTCGTCGAGGAGTCGATCGCCGAGGCGCTCGACTTC CGCCGCGCGATGACCAAGGTCGACACCGAATACGGCGACGACTGGTTCTTCAAGGTGTGGGGCCCGGACCAGTTCGCCGA GGAAGGCATCGGCTCGCGCGACGACTGGATGCTGCGTCCGGACGACGCGTGGCACGGCTTCGGCCCGCTCGCCGAAGGCT TCAACATGCTCGACCCGATCAAGGCGACGATCGTCACGCCGGGTCTGAACATGGATGGCGGCTTCGACGACACCGGCATT CCCGCGGCGATCGTCACGAAGTACCTGGCCGAGCACGGCATCATCGTCGAGAAGACGGGTCTGTACTCGTTCTTCATCAT GTTCACGATCGGCATCACGAAGGGCCGCTGGAACTCGATGGTGACCGAGCTGCAGCAGTTCAAGGACGACTACGACACCA ACCAGCCGCTGTGGCGTGTGCTGCCCGAGTTCGTCGCGCTTCATCCGATGTACGAGCGTGTCGGCCTGCGCGATCTGTGC CAGCAGATCCACGGCGTGTATCGCGCGAACGACATCGCCCGTCTGACGACCGAGATGTACCTGTCGAGCATGGAGCCGGC GATGAAGCCGTCCGACGCATTCGCGAAGCTCGCGCACCGCGAGATCGACCGGGTACCGATCGACGAGCTCGAAGGCCGTG TCACGTCGATCCTGTTGACGCCGTATCCGCCGGGCATTCCGCTGCTGATTCCGGGCGAGCGCTTCAACAAGACCATCGTC AACTATCTGCGTTTCGCGCGCGAGTTCAACGAGCGCTTCCCGGGCTTCCATACGGATATCCACGGGCTCGTCGGCGAAAT GGTCAACGGGCGCATCGAATACTTCGTCGATTGCGTGCGCATCTGA Protein sequence : MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGAEVLGLTSYGDLTSFAQQSSRASCFILSIDDDELLPYVDNVVVEG ETPELAAAIVALRAFVTEVRRRNADIPIFLYGETRTSRHLPNDILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPP FFKELVQYAEEGSYSWHCPGHSGGVAFLKSPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSAD HVFFVTNGTSTSNKIVWHGTVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNNFGIIGPIPRSEFEPENIRKKIEA NPFAREALAKNPNLKPRILTITQSTYDGVVYNVEMIKEMLGEWLDTLHFDEAWLPHAEFHEFYQDMHAIGAGRPRIGAMI YATHSTHKLLAGISQASQIVVQDSKNSRFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEAPGGTALVEESIAEALDF RRAMTKVDTEYGDDWFFKVWGPDQFAEEGIGSRDDWMLRPDDAWHGFGPLAEGFNMLDPIKATIVTPGLNMDGGFDDTGI PAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVTELQQFKDDYDTNQPLWRVLPEFVALHPMYERVGLRDLC QQIHGVYRANDIARLTTEMYLSSMEPAMKPSDAFAKLAHREIDRVPIDELEGRVTSILLTPYPPGIPLLIPGERFNKTIV NYLRFAREFNERFPGFHTDIHGLVGEMVNGRIEYFVDCVRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 3e-111 | 41 |
