|
Name : BC1002_0639 (BC1002_0639) Accession : YP_003604251.1 Strain : Genome accession: NC_014117 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 712217 - 714097 bp Length : 1881 bp Strand : + Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: bpy:Bphyt_0902 polysaccharide biosynthesis protein CapD DNA sequence : ATGAAAAGCTTCAAAGCCAGATGGCTTTCGTTCAGTGCGTTTGCGTTCGACCTGTGCGCGGTGGCCATGGCCTGGATGCT GGCCTATGTGATCCGGTTCAACGGACCGGTGCCCGCGCCGTTCTGGTCGAGCGGGCTGCATGCACTCGTGTGGGTGCTGC TGATCTACGCGGTGATGTTTCGCAGCTACGGCCTTTATCGCGGCATGTGGGTGTTCGCGAGCCTGCCCGATCTCGTGCGG ATCGCGAAGGCGATCGGCGTCGGCGCGCTCGTCGTCGTGATCGGCTCGGCGCTGTTGCAGCCCGCGCCGGTCGTGCCGCG CTCGGTGCTGATCGTGTCGCCGATGCTGCTGTTCCTGACCATGGGCGGCTCACGCGCGCTGTATCGGGCGGCCAAGGAGT TCTATCGCTACGGCGGGCTGGTCGGTCAGGGCAAGCCGGTGCTCGTGCTCGGCGCGGGCAATGCCGGCGCGAACCTCGTG CGCGAGCTGAAGCGCTCGGGCCAATGGCGCCTCGTCGGTCTGCTCGACGACGATCCGATCAAGCAGGGCCGTGAAATCTA CGGCTATCGCGTGGTGGGTGCGATCAGCGATCTGCAGAAAATCTGCGCGGAGCTAAAGGTCGAGCACGTGATCATCGCGG TGCCGTCGGCGTCGGTGGAAGCGCATCGGCGCATCGCCACGCTGTGCGTGCGCGCAGGCGTACGCGCGATGACGCTGCCC GCGCTCACGCCGCTCACGCAAGGCCAGGCGTTCCTGTCGCGCGTGCGGCAGATCGATCTCGAAGACCTGCTCGGCCGCGA TCCGGTGACGATCGACACCGAGCACGTCGCCGCGCTGCTGAAAAACCGCGTCGTGATGGTGACGGGCGCGGGCGGCTCGA TCGGCTCGGAGCTGTGCCGGCAGATCCTGCGCTTCGGTCCGGTGCAACTGGTCGCGTTCGACATCTCCGAGTTCTCGATC TATCGCCTGAACGAAGAACTGCGCGACAAGTATCCGGAAGTGTCGGTGGTGCCGCTCGTCGGCGACGTGAAGGACTCGCT GCTGCTCGATCAGGTGATGGCGCGCTACTGTCCGCACATCGTGTTTCATGCGGCAGCCTACAAGCACGTGCCGTTGATGG AAGAGGTCAATACGTGGCAGGCGGTGCGCAACAACGTGCTCGGCACGTACCGCGTTGCGCGCGCGGCGATCCGTCACGAC GTCGCGCATTTCGTGCTGATCTCGACCGATAAGGCCGTCAACCCGACCAACGTGATGGGCGCGAGCAAGCGGCTCGCGGA GATGGCGTGCTCGGCGCTGCAGCAGCAGGGCGCGCGGCGCACGCAGTTCGAAACCGTGCGTTTCGGCAACGTGCTCGGCA GCGCGGGCAGCGTGATTCCGAAGTTCCAGGAGCAGATCGCGCGCGGCGGACCGGTGACGGTCACGCATCCGGAGATTACG CGTTTCTTCATGACGATTCCGGAGGCGTCGCAACTCGTGTTGCAGGCATCGAGCATGGGGCGCGGCGGCGAGATTTTCAT TCTTGACATGGGCAAGCCGGTGCGTATCGCCGATCTCGCGCACGATCTGATCCGCCTGTACGGCTTCACCGAAGAGCAGA TTCGTGTCGTGTTCACGGGTTTGCGGCCTGGCGAAAAGCTCTACGAGGAACTGCTCGCCGACGACGAAACCACCACGCGC ACGCCGCACCCGAAGCTGCGCATCGCGCAGGCGCGCGAGGTGCCGGACAGCCTGATCGACAACCTGCTGCCGTGGCTGAT GCAGCATCGCGTGCCTGCCGACGATGAAGTGCGGCGCGATCTGCGGCGCTGGGTGCCGGAGTATCTGCCGGCGACGGCGA CGACGCTGCGTAGTGTGGCGCCGGCGACGCGGGTGTCGTAG Protein sequence : MKSFKARWLSFSAFAFDLCAVAMAWMLAYVIRFNGPVPAPFWSSGLHALVWVLLIYAVMFRSYGLYRGMWVFASLPDLVR IAKAIGVGALVVVIGSALLQPAPVVPRSVLIVSPMLLFLTMGGSRALYRAAKEFYRYGGLVGQGKPVLVLGAGNAGANLV RELKRSGQWRLVGLLDDDPIKQGREIYGYRVVGAISDLQKICAELKVEHVIIAVPSASVEAHRRIATLCVRAGVRAMTLP ALTPLTQGQAFLSRVRQIDLEDLLGRDPVTIDTEHVAALLKNRVVMVTGAGGSIGSELCRQILRFGPVQLVAFDISEFSI YRLNEELRDKYPEVSVVPLVGDVKDSLLLDQVMARYCPHIVFHAAAYKHVPLMEEVNTWQAVRNNVLGTYRVARAAIRHD VAHFVLISTDKAVNPTNVMGASKRLAEMACSALQQQGARRTQFETVRFGNVLGSAGSVIPKFQEQIARGGPVTVTHPEIT RFFMTIPEASQLVLQASSMGRGGEIFILDMGKPVRIADLAHDLIRLYGFTEEQIRVVFTGLRPGEKLYEELLADDETTTR TPHPKLRIAQAREVPDSLIDNLLPWLMQHRVPADDEVRRDLRRWVPEYLPATATTLRSVAPATRVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-88 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 7e-89 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BC1002_0639 | YP_003604251.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 7e-89 | 46 |
| BC1002_0639 | YP_003604251.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-81 | 44 |
