Gene Information

Name : BC1002_2995 (BC1002_2995)
Accession : YP_003606552.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 3309362 - 3311002 bp
Length : 1641 bp
Strand : +
Note : SMART: ATPase AAA; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: bpy:Bphyt_3773 flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region

DNA sequence :
GTGGTGAAGCCGACACTCGACGAGATCCGCGCGAGCGACCTGACGCCGCTCGAACGCGAGCTCGCGTTGGCGTCTTTCGG
CGCCGAGGCGCTGGCCGATGTCGAGTCGTCCGGTTTTCCGGAGCCCCCGGATGCGGCATGGCACGCTCCCGCGACTGCGC
ATCCGGCGACAGGCGCGGCGGTGAGCCGCGAGTCCGCCGCGACGGACCACGCCGCTCACGCCCCGCACGCACCGTCCTAC
GATCCCGCGCTCGACATCAATCCGCACATGCAGGCATGGCGCGGCCAGCTCGACGCGCTGCGCGCACGCAATGCGATCGC
GAAGCCGCTGCGCGCGTGCGGGCGCCTGACACGCGCGGCCGGTCTGGTGCTCGAAGCAGTCGGTCTGCGCCTGTCGGTCG
GCGCCGAAGTGATGATCGAGCTGCCGCCCGGCAGTTCGCTGCCGATGGCCGAAGCCGAAGTGGTCGGCTTCTCCGGCGAC
AAGCTGTTCCTGATGCCGACCACCGAAGTGATCGGCCTGTTGCCCGGTGCGCGCGTCTTTCCGCTCGAAAGCGCGCCGAT
CGCAGATCCGCTCGCCGGCGCGAAGCGTCTGCCGGTCGGCTGGGAATTGCTCGGCCGCGTGCTCGACGCATCGGGCCGTC
CGCTCGACGGGCTCGGCCCGCTTGGCACGCAAACCGATGCGCCGCTGTCCGCGCCGGTCATCAATCCGCTCAATCGCGAG
CCGATTCACAAGGTGCTCGACGTCGGCGTGCGCGCGATCAACTCGCTGTTGACCGTCGGCCGTGGTCAGCGCATGGGGCT
GTTCGCGGGTTCGGGCGTCGGTAAATCGGTGCTGCTCGGCACGATGGCGCGCTACACCAGCGCCGAGGTGATCGTGATCG
GCCTGATCGGCGAACGCGGCCGGGAAGTGAAGGAGTTCATCGAACAGATTCTCGGCGAGGAAGGCTTGGCGCGCTCGGTC
GTGATCGCCGCGCCGGCCGACGTGTCGCCGCTATTGCGGATGCAGGCCGCCGCGTACTCGACCTCGCTCGCCGAATACTT
CCGCGACCAGGGCAAGCACGTGCTGCTGCTGATGGATTCGCTGACCCGTTACGCGATGGCGCAGCGCGAGATCGCGCTGG
CGATCGGCGAGCCGCCCGCCACCAAGGGCTATCCGCCGTCGGTGTTCGCGAAGCTGCCGGCGCTGGTCGAGCGCACCGGC
AACGGACCGGCGGGCGGCGGCTCGATCACCGCGTTCTACACGGTGCTCACCGAAGGCGACGACCAGCAGGACCCGATCGC
CGACTCGGCGCGCGCGATTCTCGACGGTCACATCGTGCTGTCGCGCTCGCTCGCCGAAGCCGGCCACTACCCCGCGATCG
ATATCGAAGCGTCGATTAGCCGGGCAATGACCGCGTTGATCGACGATAACCATCTGAATAAAACGCGTATGTTCAAGCAG
ATGCTGTCGCGCTATCAGCGCAACCGCGATCTGATCAACGTCGGCGCTTATTCCGCCGGGCGCGACGCGTTGCTCGATCG
CGCGATCGCGCTGTACCCGCGGATGGAAGCGTTCCTGCAGCAAGGTTTTCGCGAGTGCGCTAACTTCCAGCCGAGCATCG
ACATGCTGAACGCGCTGTTTGCCCAGGATCGAGGAGGCTGA

Protein sequence :
MVKPTLDEIRASDLTPLERELALASFGAEALADVESSGFPEPPDAAWHAPATAHPATGAAVSRESAATDHAAHAPHAPSY
DPALDINPHMQAWRGQLDALRARNAIAKPLRACGRLTRAAGLVLEAVGLRLSVGAEVMIELPPGSSLPMAEAEVVGFSGD
KLFLMPTTEVIGLLPGARVFPLESAPIADPLAGAKRLPVGWELLGRVLDASGRPLDGLGPLGTQTDAPLSAPVINPLNRE
PIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSV
VIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTG
NGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLNKTRMFKQ
MLSRYQRNRDLINVGAYSAGRDALLDRAIALYPRMEAFLQQGFRECANFQPSIDMLNALFAQDRGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-82 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-82 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-81 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-82 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-81 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-81 47
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-66 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-79 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-79 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-77 46
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 3e-62 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 3e-62 45
escN AAC38383.1 EscN Virulence LEE Protein 1e-72 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-72 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 9e-73 45
escN AAK26715.1 EscN Virulence LEE Protein 9e-73 45
escN AAL57542.1 EscN Virulence LEE Protein 9e-73 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-73 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-72 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-72 45
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-72 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-72 45
escN AAC31513.1 L0034 Virulence LEE Protein 1e-72 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-72 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-71 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-71 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-67 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-67 43
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-73 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-68 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 5e-68 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 4e-67 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-67 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-67 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-69 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-67 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 9e-66 41
invC AAS66861.1 InvC Not tested SSR-2 Protein 3e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG2499 Protein 0.0 86
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG2331 Protein 5e-145 71
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG1254 Protein 5e-126 64
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-83 46
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG2144 Protein 7e-80 46
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-80 45
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG0390 Protein 7e-78 45
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG0730 Protein 6e-73 45
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG0812 Protein 6e-73 45
BC1002_2995 YP_003606552.1 flagellar protein export ATPase FliI VFG1008 Protein 3e-64 41