Gene Information

Name : BC1002_2469 (BC1002_2469)
Accession : YP_003606031.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2755721 - 2756671 bp
Length : 951 bp
Strand : -
Note : KEGG: bxe:Bxe_A0750 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
ATGAGCACGACCCCCGATACCGCTGAACGAGTCGAAGACACAGCCGCCGTATCGCCGCTGCTGCTGACCAGCTGCGCATC
GATCGACGCCTTTTGCGACGCGCTGTGGCTCGAACACGGCCTGTCGCGCAACACGCTCGACGCGTATCGCCGCGACTTGC
GTCTGTTCTGCGAATGGCTCGCGCACACGCGCAATGCGTCGCTCGATACCGCGAGCGAAGCCGACCTGAGCGCCTACAGC
GCGGCGCGGCAAAAGGACAAGGCGACCTCGGCGAACCGCCGGCTGTCGGTGTTTCGCCGCTATTACGCGTGGGCGGTGCG
TGAGCATCGCGCGGCCGCCGATCCTACATTGCGCCTCCGCTCGGCGAAGCAGCCGCCGCGTTTTCCGTCGACGTTGAGCG
AAGCACAGGTCGAAGCGCTGCTCGGCGCGCCCGACATCGACACGCCGCTCGGCTTGCGCGATCGCACGATGCTCGAGCTG
ATGTACGCGAGTGGTTTGCGCGTGACCGAACTGGTCACGCTGAAGACCGTCGAGGTGGGACTCAACGAAGGCGTCGTGCG
CGTCACCGGCAAAGGCTCGAAGGAGCGGCTCGTTCCGTTCGGCGAAGAAGCGCACGCGTGGATCGAGCGCTATCTTCGCG
AGGCGCGCCCGGCGCTGCTGGGCCCGCGCGCGGCCGACGCGCTCTTCGTGACGGCACGCGCCGAAGGCATGACGCGCCAG
CAGTTCTGGAACATCATCAAGCGACACGCGCAGGCGGCGGGTGTGCATGCGCCGTTGTCGCCGCATACGTTGCGGCATGC
GTTCGCGACGCATCTGCTCAATCACGGTGCCGATCTGCGCGTCGTGCAATTGCTGCTCGGCCACACCGATATTTCGACGA
CGCAGATCTACACACACGTCGCGCGAGAGCGTCTGAAATCGCTGCATGCGCAGCATCATCCGCGCGGATGA

Protein sequence :
MSTTPDTAERVEDTAAVSPLLLTSCASIDAFCDALWLEHGLSRNTLDAYRRDLRLFCEWLAHTRNASLDTASEADLSAYS
AARQKDKATSANRRLSVFRRYYAWAVREHRAAADPTLRLRSAKQPPRFPSTLSEAQVEALLGAPDIDTPLGLRDRTMLEL
MYASGLRVTELVTLKTVEVGLNEGVVRVTGKGSKERLVPFGEEAHAWIERYLREARPALLGPRAADALFVTARAEGMTRQ
QFWNIIKRHAQAAGVHAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHVARERLKSLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-51 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-51 56