Gene Information

Name : BC1002_2309 (BC1002_2309)
Accession : YP_003605878.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 2581345 - 2582496 bp
Length : 1152 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bpy:Bphyt_3099 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGTTCTCGCAAACCGATTTCGTCCATATGGAACGCGCGCTCGCGCTCGCGAAGCGCGGCATGTACACGACCGACCCGAA
TCCGCGCGTCGGTTGCGTGCTCGTCAGAAACGGCGAGGTGATCGGCGAAGGCTACACGCAGCCTGCCGGACAGGATCACG
CCGAGATTCGCGCGCTGAAGGACGCGCGCTCGCGCGGCCACGATCTGCGCGGCGCAACCGCCTACGTGACGCTCGAACCG
TGCAGCCATTTCGGCCGCACGCCGCCGTGCGCGAACGCGCTGATCGAAGCGCAGATCGGCCGCGTGATCGCGGCGATGGA
AGATCCCAATCCACAGGTCTCCGGCCGTGGTCTCGCGATGCTGCGCGAAGCCGGTATCGAAGTGCGCTGCGGGCTGCTCG
CGAACGAAGCGCGGGAGCTGAACATCGGCTTCGTGTCGCGCATGACGCGCGGCCGTCCGTGGGTGCGCATGAAAGTGGCG
GCATCGCTCGATGGCCGCACCGGCTTGCCTTCGGGTGAGAGCCAGTGGATCACGAGCGCGGCCGCGCGCGCCGACGGTCA
TGCGTGGCGTGCGCGCGCGTCGGCGATCCTGACGGGCATCGGCACCGTGCGCGAAGACAATCCGCGCATGACCGTGCGCG
CGGTCGATACGCCGCGCCAACCGCACCGCGTGCTGATCGACAGCCAGCTCGACGTGCCGCTCGACGCGCAGATCCTGGCC
GGCGCGCCGACGCTGATCTTCTGCGGCGAACTCGATGCGCGTCTCGAAGAACGCGCGGTTGCGCTGCGCGAGCGCGGCGC
CGAGATCGTGCCGCTGCCGAACGCGTTCGGCAAGGTGGATCTGCCGCGCATGCTGAGCGTGCTCGGCGAGCGCAACGTGA
ACGAATTGCACGTCGAAGCCGGCTACAAACTGAACGGCTCGCTGCTGCGCGAAGGCTGCGTCGATGAACTGCTCGTCTAT
CTCGCGCCGAGCCTGCTCGGCATGGACTCGATGAGCATGTTCAATCTGGACTCGCCCGACCTGCTCGAAGACCGCGTGAA
GCTCAATTTCCACATGGTCGAACGGATCGGCGACGATCTGCGGATTCTCGCGCGCTTCGCACCGACAGCCGCACCCGGGA
CCGACGCCGTGTCCCCCACCGTTTCGAAATGA

Protein sequence :
MFSQTDFVHMERALALAKRGMYTTDPNPRVGCVLVRNGEVIGEGYTQPAGQDHAEIRALKDARSRGHDLRGATAYVTLEP
CSHFGRTPPCANALIEAQIGRVIAAMEDPNPQVSGRGLAMLREAGIEVRCGLLANEARELNIGFVSRMTRGRPWVRMKVA
ASLDGRTGLPSGESQWITSAAARADGHAWRARASAILTGIGTVREDNPRMTVRAVDTPRQPHRVLIDSQLDVPLDAQILA
GAPTLIFCGELDARLEERAVALRERGAEIVPLPNAFGKVDLPRMLSVLGERNVNELHVEAGYKLNGSLLREGCVDELLVY
LAPSLLGMDSMSMFNLDSPDLLEDRVKLNFHMVERIGDDLRILARFAPTAAPGTDAVSPTVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-53 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-53 42