Gene Information

Name : BC1002_1962 (BC1002_1962)
Accession : YP_003605535.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2201283 - 2203214 bp
Length : 1932 bp
Strand : +
Note : KEGG: bxe:Bxe_A1449 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCCAATCCGAAGTTTATTTCCGCCGAAGCCCATGTGGACGAGGCCGCCGTCGCGCCGCTGCCGAATTCGCGCAA
GGTCTACGTGACCGGCTCACGCCCCGACATCCGCGTGCCGATGCGTGAAATCTCGCAAGCAGACACGCCCGACAGCTTCG
GCGGCGAAAAGAATCCGCCGATCTACGTGTACGACACGTCGGGCCCCTACTCCGACCCGGACGCGAAGATCGACATTCGC
GCGGGCCTGCCCGCGCTGCGTCAGGCGTGGATCGAGGAGCGCGGCGACACCGAGCCGCTGACCGGCCTGTCGAGCAGCTT
CAGCCGCGAGCGCGCCGCCGATCCGGCCACCGCGCAGCTGCGTTTTCCCGGCCTGCATCGCACGCCGCGCCGCGCGATCG
CCGGCAAGAACGTGACGCAGATGCACTACGCGAAGCAAGGCATCATCACGCCGGAAATGGAATACATCGCGATTCGCGAA
AACCAGCGCCGTGCCGAGTATCTGGAGACGCTGAAGGCGAGCGGCCCGAACGGCGCGAAGCTCGCCGCGATGATGGGCCG
CCAGCACCCCGGCCAGGCATTCGGCGCGAGCGCATTCGGTCCGAACGGCCTCACCGAAATCACCGCGGAATTCGTGCGCG
AGGAAATCGCGCGCGGCCGCGCGATCATCCCGAACAACATCAATCACCCGGAAAGCGAGCCGATGATCATCGGCCGCAAT
TTCCTCGTGAAGGTCAATGCGAACATCGGCAACTCGGCGGTGACCTCCTCCATCGGCGAGGAAGTCGACAAGATGACGTG
GGCGATCCGCTGGGGCGGCGACACGGTGATGGATCTGTCGACCGGCAAGCACATTCATGAAACGCGCGAATGGATCATCC
GCAACAGCCCGGTGCCGATCGGCACGGTGCCGATCTATCAGGCGCTCGAAAAGGTCAACGGCAAGGCTGAAGATCTGACG
TGGGAGATCTTCCGCGACACGCTCATTGAACAGGCTGAGCAGGGCGTCGACTACTTCACGATCCACGCTGGCGTGCGTCT
GCAATACGTGCCGCTCACCGCGAACCGGATGACCGGCATCGTGTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGTCTCG
CGCATCACAAGGAAAGCTTCCTGTACGAGCATTTCGAAGACATCTGCGAAATCATGAAGGCCTACGACGTGGCCTTCTCG
CTCGGCGACGGCCTGCGCCCCGGCTCGATCTACGACGCGAACGACGAAGCGCAACTGGGCGAGCTGAAGACGCTCGGCGA
GCTCACGCAGATCGCGTGGAAGCACGACGTGCAGGTGATGATCGAAGGTCCGGGACATGTGCCGATGCAGCTGATCAAGG
AGAACATGGACCTGCAGCTCGACTGGTGCGACGAAGCGCCGTTCTACACGCTCGGGCCGCTCACGACCGATATCGCGCCG
GGCTACGACCACATCACGTCGGGTATCGGCGCCGCGATGATCGGCTGGTTCGGCACCGCGATGCTGTGTTACGTGACGCC
GAAGGAACACCTCGGTCTGCCGAACAAGGACGACGTGAAGACCGGCATCATCACGTACAAGCTCGCCGCGCACGCAGCGG
ACCTCGCGAAGGGTCATCCCGGCGCGCAGGTACGCGACAATGCGCTGTCGAAGGCGCGCTTCGAATTCCGCTGGGAAGAC
CAGTTCAATCTCGGTCTCGATCCGGACAAGGCGCGTGAATTCCACGACGAAACGCTGCCGAAGGACTCGGCCAAGGTCGC
GCATTTCTGCTCGATGTGTGGCCCGCACTTCTGCTCGATGAAGATAACCCAGGACGTGCGCGAGTTCGCCGCGCAACAAG
GCGTCAGCGATAACGAAGCGCTGCAGAAAGGCATGGAAGTCAAGTCGATCGAATTCATGAAGCAAGGCGCGGAGATTTAT
CAGCGGCAATAA

Protein sequence :
MNANPKFISAEAHVDEAAVAPLPNSRKVYVTGSRPDIRVPMREISQADTPDSFGGEKNPPIYVYDTSGPYSDPDAKIDIR
AGLPALRQAWIEERGDTEPLTGLSSSFSRERAADPATAQLRFPGLHRTPRRAIAGKNVTQMHYAKQGIITPEMEYIAIRE
NQRRAEYLETLKASGPNGAKLAAMMGRQHPGQAFGASAFGPNGLTEITAEFVREEIARGRAIIPNNINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVAFS
LGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCDEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKTGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWED
QFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVSDNEALQKGMEVKSIEFMKQGAEIY
QRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 75
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 75
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73