Gene Information

Name : BC1002_1878 (BC1002_1878)
Accession : YP_003605452.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2101778 - 2102533 bp
Length : 756 bp
Strand : -
Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: bxe:Bxe_A1567 ABC lipoprotein efflux pump, ATPase subunit; SMART: ATPase AAA

DNA sequence : 
ATGAATGACCGCCTCGTCCATCCCTCAACCGATTCATCCATGACCGCTCAGGACCCCGCATCGTATCCGTACGTGCTCGA
AGCCACCGGCATTTCCAAATCGTTCGTGCAGGGTGGCCTGAACGTGCAGGTGCTCAACAATGCTGAACTCGCCGTGCGGC
GAGGCGAAAAGCTCGCGATCGTCGGCGCGTCGGGTTCCGGCAAGAGCACGCTGCTGCACGTGCTCGGCGGTCTCGACGAT
CCGAGCGCGGGCGAGGTGTCGGTGCTCGGCAAGCCGTTCACGAAGCTCTCCGAGCGTGAGCGCAACGACCTGCGCAATCG
CGCGCTCGGTTTCGTTTATCAGTTTCACCATCTGCTGCCGGAGTTTTCCGCGCTCGATAACGTCGCGATGCCGCTGCGGA
TTCGTCGCGAGACGACCGAAGTCGCGCGCCGCGAGGCAATGGCGGTGCTGGAGCGCGTCGGCATGGGGCATCGCGCGAAG
CATCGGCCGGGCGAGCTGTCGGGCGGCGAGCGTCAGCGTGTCGCGATCGCGCGCGCGCTCGTCACGAAGCCCGCCTGCGT
GCTCGCCGACGAGCCGACCGGCAACCTCGACGGCGGCACCGCCGACACGGTATTCAACCTGATGCTCGAACTGTCGCGCA
CGCTCGAGACGAGCTTCGTGATCGTCACGCACGACCCGGAACTGGCGGGGCGCTGCGATCGCATCATGCGGCTGCGCGAC
GGCGTGCTCCACGAAGAGCCGCCCGTGCCGGTCTGA

Protein sequence : 
MNDRLVHPSTDSSMTAQDPASYPYVLEATGISKSFVQGGLNVQVLNNAELAVRRGEKLAIVGASGSGKSTLLHVLGGLDD
PSAGEVSVLGKPFTKLSERERNDLRNRALGFVYQFHHLLPEFSALDNVAMPLRIRRETTEVARREAMAVLERVGMGHRAK
HRPGELSGGERQRVAIARALVTKPACVLADEPTGNLDGGTADTVFNLMLELSRTLETSFVIVTHDPELAGRCDRIMRLRD
GVLHEEPPVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_1878 YP_003605452.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-31 43
BC1002_1878 YP_003605452.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 7e-37 42