Gene Information

Name : BC1002_1813 (BC1002_1813)
Accession : YP_003605388.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2025046 - 2026677 bp
Length : 1632 bp
Strand : -
Note : KEGG: bxe:Bxe_A1639 ABC peptide transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA

DNA sequence :
GTGAGCGCGCTGCGGCAAATCGATCCGCAATCGACGGATACGCCGCTGCTCGAACTCGACCATCTGCGGGTTGCGTTCGG
CGACACGTTGGCCGTCGACGACGTCACGCTCGCGATCGCGCGCGGCGAGCGCGTCGCGCTCGTCGGCGAGTCGGGCTCGG
GCAAGAGCGTGACCGCACTGTCGGTGCTGCGCCTGCTGAACGACGCGCAGGTGAGCGGCGCGATTCGCTTCGATGGCGAA
GACCTGCTCGCGAAGAGCGAGCGCTCGATGCGCGGGCTGCGCGGCTCGGCCATCGCGATGATCTTTCAGGAGCCGATGAC
CGCGCTCAATCCGCTCTATACGATTGGCGACCAGATTGCGGAGACGATCGTCGTGCATGACGGCGTCAGCATGGCCGAGG
CGTGCAGTCGGGCGGTCGCGTTGCTTGCGCGCACCGGCATCGCCGAACCGGAGAAGCGCGTCAACAGCTATCCGCATCAG
CTGTCGGGCGGCCAGCGGCAGCGCGCAATGATCGCGATGGCGCTCGCCTGTCGGCCGCGCCTGTTGCTCGCCGACGAGCC
GACCACCGCGCTCGACGTGACGATTCGCGCGCAGATCGTCGAGCTGCTGCTGGAATTGCAGCGCGACGAAGCACAAAAGC
GCGGCATGGCCGTGCTGCTGATCACGCACGACCTGAACCTGGTGCGTCACTTCGCGCAGCGTGTTGCGGTAATGGAGCGG
GGCGTGCTGGTCGAAACCGGCACGGTCGAGCAGGTGTTCGAGGCGCCGCGCCATCCATATACCCAGCGGCTGCTCGCCAG
CCGGCCGCAGCGCGAGGTCGCGCCGGTGCTGCCGATCTCGCCAGTGCTGCTCGAAGCGCGCGACGTGTCGGTCGACTTCA
AAACGAAACTGCCGGGCCTGCGTGGCTGGTTCGGCGGCGGGCGGTTTCGCGCGGTCGACGCGGCGAACGTGTCGGTGCGC
CAGGGCGAGACGCTCGGGATCGTCGGCGAATCGGGGTCGGGCAAGTCGACGCTCGCGATGGCGCTGCTCGGTCTGCAGCG
CACCGCGCACGGCGAGATCGAGTTTCAGGGCAGGGCGCTCGCGAGCTATCGGGGCGCCGAAAAGACCGCGCTGCGCTCGA
ATATGCAGGTTGTCTTTCAAGACCCTTTTAGTTCGCTTTCACCGCGGCAGACGATCGAGCGGATCGTCGGCGAGGGGCTC
GCGCTGCATCGGCCGCAAATGACCCCGCAGGCCCGGCGCGACAAGGTGGTCGCGGTGCTGCGCGAAGTCGGCATCGACCG
TGCCGTGCTGTATCGCTATCCGCATGAGTTTTCGGGCGGGCAGCGGCAGCGCATCGCCATCGCGCGCGCGCTGGTACTGG
AGCCGCGCGTGCTGATCCTCGACGAACCGACCAGCGCGCTCGACGTGTCGATTCAGCAGCAGGTGCTCAAGCTGCTCACC
GGTTTGCAGCACAAGTACAACCTCGGCTTCGTGTTCATCAGCCACGACCTGGAGGTGATCGGGGCGATGGCGCACCGTGT
CGTGGTGATGCAAAACGGATCGATCGTCGAGACTGGGGATGTCGAGAAGATTTTTGCGGCACCCGCGCATCCTTACACGC
GAAAGCTGCTGAAAGCGGCGCTTGACCGTTGA

Protein sequence :
MSALRQIDPQSTDTPLLELDHLRVAFGDTLAVDDVTLAIARGERVALVGESGSGKSVTALSVLRLLNDAQVSGAIRFDGE
DLLAKSERSMRGLRGSAIAMIFQEPMTALNPLYTIGDQIAETIVVHDGVSMAEACSRAVALLARTGIAEPEKRVNSYPHQ
LSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVELLLELQRDEAQKRGMAVLLITHDLNLVRHFAQRVAVMER
GVLVETGTVEQVFEAPRHPYTQRLLASRPQREVAPVLPISPVLLEARDVSVDFKTKLPGLRGWFGGGRFRAVDAANVSVR
QGETLGIVGESGSGKSTLAMALLGLQRTAHGEIEFQGRALASYRGAEKTALRSNMQVVFQDPFSSLSPRQTIERIVGEGL
ALHRPQMTPQARRDKVVAVLREVGIDRAVLYRYPHEFSGGQRQRIAIARALVLEPRVLILDEPTSALDVSIQQQVLKLLT
GLQHKYNLGFVFISHDLEVIGAMAHRVVVMQNGSIVETGDVEKIFAAPAHPYTRKLLKAALDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-87 45
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-87 45
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-87 45
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-87 45
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-93 41