Gene Information

Name : BC1002_1628 (BC1002_1628)
Accession : YP_003605207.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1817913 - 1818572 bp
Length : 660 bp
Strand : +
Note : KEGG: bpy:Bphyt_2197 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCGCTTACTCCTCGTAGAAGACGACGAGCTCATCGGCTGCGGTGTCGAAGCGGGCCTTCGTCAGGCCGGCTTCACGGT
CGACTGGGCACGCGACGGCCACAAGGCCAGCCTCGCGCTCGACACGACTCAATATGCATTGGTGGTACTCGACCTCGGCC
TGCCGCGCGTGAGCGGCACCGAGCTGCTCAAACGCATGCGCGACGCCGGCAATGACGTGCCGGTGCTGGTGTTGACCGCG
AAAGGCACGGTCGTCGATCGGGTCGGCGGTCTCGAAGCGGGCGCCGACGACTATCTCGGCAAGCCGTTCGATCTCACCGA
ACTGGTGGCGCGGTGCCGCGCGCTGTTGCGCCGCGCACAAGGTCGCAGTATCGATCTGATTCGTTACCAGAATCTGACAG
TGAATCCGGCCGCGCAAACGGTGCAGATCGACGAGGCGCGCGTGCCGCTCACATCGCGCGAATGGGCGATTCTGCTGCAA
CTGCTGACCAATCTCGGCATTCCGCAGTCGCGCTCGCGGCTCGAGGAAAGCCTGTACGGCTGGCAGGAAGAAATCGAAAG
CAATGCGATCGAGGTGCATGTGTCGAACCTGCGCAAGAAGCTCGGCGCAAACCTGATCAAGACCGTGCGCAATATCGGCT
ATGTGATGGAGAAAGAATGA

Protein sequence : 
MRLLLVEDDELIGCGVEAGLRQAGFTVDWARDGHKASLALDTTQYALVVLDLGLPRVSGTELLKRMRDAGNDVPVLVLTA
KGTVVDRVGGLEAGADDYLGKPFDLTELVARCRALLRRAQGRSIDLIRYQNLTVNPAAQTVQIDEARVPLTSREWAILLQ
LLTNLGIPQSRSRLEESLYGWQEEIESNAIEVHVSNLRKKLGANLIKTVRNIGYVMEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-32 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_1628 YP_003605207.1 two component transcriptional regulator, winged helix family BAC0487 Protein 1e-34 46
BC1002_1628 YP_003605207.1 two component transcriptional regulator, winged helix family BAC0347 Protein 2e-24 42
BC1002_1628 YP_003605207.1 two component transcriptional regulator, winged helix family BAC0111 Protein 6e-25 41
BC1002_1628 YP_003605207.1 two component transcriptional regulator, winged helix family BAC0308 Protein 3e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_1628 YP_003605207.1 two component transcriptional regulator, winged helix family VFG0473 Protein 4e-31 42