Gene Information

Name : BC1002_1624 (BC1002_1624)
Accession : YP_003605203.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1814274 - 1814936 bp
Length : 663 bp
Strand : -
Note : KEGG: bpy:Bphyt_2190 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCGCCTGCTATTGGTCGAAGACGACGACATGATCGCGGAATCGGTGCTGGGCGCGATGCGGCGCGCCGGCTACGCGAT
CGACTGGGCCGAGGACGGCCGCGCGGCGGAACTGTCGCTCGATAACGGCGTATACGACCTCGTGCTGCTCGACCTCGGGC
TGCCGAAAAAAGACGGCGTCGCCGTGCTGAACGCGTATCGCCGCAACGGCGGCGCGGCGCCGGTAATCATCCTGACCGCA
CGCGACGCGATCGACGAACGCATCCGCGGTCTCGACGCCGGCGCCGACGACTACCTGGTCAAGCCGTTCGATCTCGACGA
ACTGGCCGCCCGCATTCGCGCGCTGCTGCGCCGGCGCACCGGCCAGAAGCAGCCGGTCTACAGCCACGGCGAACTGACGC
TCGACCCCGCCGCGCATGAAGTCACCAAGGACGGCGTGCCGCTGCCGCTGGTGCCGCGCGAATTCGCGTTGCTGCAGGCG
CTGATCGAGGAGCCGACCCGCGTGTTCACGAAGGCCGAGCTCGAAGAAAAGCTGTACGGCTGGGGCGAGGAAGTCGGCAG
CAACACGATCGAAGTGCACGTGCACAGTCTGCGGCGCAAGATCGGCGCGGACCAGGTCGTGACCGTGCGCGGGGTCGGCT
ACCGCCTGAAGAGGTGCGGATGA

Protein sequence : 
MRLLLVEDDDMIAESVLGAMRRAGYAIDWAEDGRAAELSLDNGVYDLVLLDLGLPKKDGVAVLNAYRRNGGAAPVIILTA
RDAIDERIRGLDAGADDYLVKPFDLDELAARIRALLRRRTGQKQPVYSHGELTLDPAAHEVTKDGVPLPLVPREFALLQA
LIEEPTRVFTKAELEEKLYGWGEEVGSNTIEVHVHSLRRKIGADQVVTVRGVGYRLKRCG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-28 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_1624 YP_003605203.1 two component transcriptional regulator, winged helix family BAC0487 Protein 1e-26 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_1624 YP_003605203.1 two component transcriptional regulator, winged helix family VFG0473 Protein 1e-28 48
BC1002_1624 YP_003605203.1 two component transcriptional regulator, winged helix family VFG1390 Protein 5e-22 42