Gene Information

Name : BC1002_1246 (BC1002_1246)
Accession : YP_003604841.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1389462 - 1392152 bp
Length : 2691 bp
Strand : +
Note : KEGG: bph:Bphy_5495 ATPase; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase-like; SMART: ATPase AAA

DNA sequence :
ATGGCACGCTTGCTTTGCGATATCTGCGGTGTCCGGCCGGCGACGGTGCGGCTTGCGGTACTTCAGAACAACCAGCGTCA
GCTGCTCGACGTCTGTGATTTTCACTACGCGCAACTGACCCGCCATCAACGCTCTATCTCGCCGCTCGAAGCGCTGTTTC
GCGCGCAGGCATCGGCCCGGGAGCCGTCCGCTGCCGATCCGCATGCCGCGCAACAGCCCGTCGAAGGCGGCGAATCGTTC
AGCATCGAGCGGCATTTCAGCGATGTCGCGATGGAGATGCTGCAGCGCGCCGCTGAAACCGCGGCGCAGTTCGGCCGTCG
CGAGGTCGATACCGAACACCTGCTGTACGTGCTCGCCGACCATGCGGCCGTCGAAGCGATCCTCGCTTCGCTCGGTGTGA
AGGGGAGCGATTTGCGCGCGTATATCGACGCCAACGCGGAGAAGCGCGAGCCCGCCGCGCCGAGCCCGCGCGAGCCGATG
GGCGTCTCGCCGCGGCTGAAAAGCGCGCTCGATCGCGCGTTCCTTGCGTCCCGCCAGCTGGGTCACAGCTCGGTCGGCGC
CGAACATCTGCTGATCGGTCTGGCCGAAGTACCGGAAAGCTTTGCGGGGCAACTGCTGGGCCGGCTCGGCGTTCAAGCGC
CGGCGCTGCGTCAGCAGACGCTGCGCGCGGCCGGCGTGCAGAAGCCGTCGGCGCCGCGCCAGCCGTCGCGCACGCCGCAG
CTCGACAAGCACAGCCGGGACCTCACGGTACTCGCGCGCGAAGGCCGTCTCGATCCCGTGATCGGACGCTCGAGCGAGAT
CGAAACGATGGTCGAAGTGCTCGCGCGCCGGCGCAAGAACAACCCGGTGCTGATTGGCGAGCCCGGCGTCGGCAAAACGG
CGGTCGTCGAAGGGCTGGCTCAGCGGATGGTCAACGGCGACGTGCCGGAATCGCTGCGCAATAAGCGGCTCGTCGAGCTC
AACGTGAATTCGATCGTCGCGGGCGCAAAGTACCGAGGCGAATTCGAAGAGCGCGTGAAGCAGGTGATCGACGAAGTGCT
GGAAAACCAGGACTCGCTGGTGCTGTTCGTCGATGAAGTGCACACGATAGTCGGCGCGGGGCAGGGCGGTGGCGAAGGCG
GTCTCGATATCGCCAACGTGTTCAAGCCGCCGATGGCGCGCGGCGAACTCAATCTGATTGGCGCAACGACGCTCGCCGAA
TATCAGAAGTACATCGAAAAGGACGCGGCGCTCGAACGGCGCTTTCAGCCGGTACTGATCGCCGAGCCGTCCGTCGTGCA
GACGATCAACATTCTGCGCGGGCTGCGCGACAGGCTGGAGGCGCATCACAAGGTGACGATTCAGGACGATGCGATCGTCG
GCGCGGCGGAGTTGTCGGATCGCTATATCTCCGGGCGCTTTCTGCCCGACAAGGCGATCGATCTGATCGATCAGGCCGCG
GCGCGCGTGAATCTGTCGTCGACGTCGCGTCCTGCCGCCGTGCTCGAACTCGAAGCGGAAATCGGCCAATTGCGCCGCGA
GCAGGACTATGCGGCATCGCGCAAGCAATTCGATCGCGCGCATGCACTCGGCGGCGAGATCACCGCGAAGGAAGAGCAGT
TGCGCGACTCGACCGACGCGTGGAAGAAGAACATTGGCACCCAAACATCGCATGTGGGCATCGAGCAGGTCGCGGAAATC
GTCGCGCGCCTCACGGGCATTCCCGTCGCGCAGTTGACGGCCGAGGAAAAGGAGCGGCTTCTGAATATGGAGCAGCGCCT
GCATCAGCGCGTGATCGGCCAGGATGAAGCCGTCGTGGCCGTCAGCGATGCCGTGCGGCGCGCGCGTGCCGGCTTGCAGG
CGCGGCACCGGCCTACCGCCGTGTTTCTGTTTCTGGGGCCGACCGGTGTCGGCAAAACCGAGCTGGCGAAGGCGCTCGCC
GAAGTCGTGTTCGGCGACGAGGATGCGATGCTGCGCTTCGACATGAGCGAATACATGGAGCGTCATACCGTCGCGCGTCT
GATCGGGTCGCCGCCCGGATACGTCGGCTACGAAGAGGGCGGGCAGCTGACCGAACGCGTGCGGCGCAGACCATACTGCG
TGATCCTGCTCGACGAAATCGAAAAGGCGCATCCGGACGTGTACAACGTGCTGCTGCAGGTTTTCGACGACGGACGCCTG
ACGGACGGCAAAGGGCGCGTCGTCGACTTCAGCAATACGTTGATCATCGCGACGAGCAATCTCGCGTCCGACGTGATCAC
CGGACAGAACCGCACGGGGCCGGGATTTTTCAGCCAGGCTGGCTCCGTTAGCGTGGAAAGCGGCGTGATGAACGTGCTGC
GGCAGCATTTCAGACCGGAATTCCTGAACCGGATCGACGACATCATCGTGTTCAAGTCGCTGGGCCGCGACGAGACGCGT
CATATCGTGCGGATTCTGCTGGAGCAGGTGCGGCGCATTGCCAGCAGCCAGGACATCGAGCTGAGCTTCGACGACTCACT
CGTCGACCATGTCGCGACCGAGGGCTACCGGCCCGAGTTCGGCGCGCGCGAACTGCGCCGGCAGATTCAGCAGCGCGTCG
AGAACCCGCTTGCGAAGGCGCTGATCAATGGCGAGATCGGTGAAGGGATGCGGGTGGTTTGCCGCTACGACTCGCAGGAG
CAGCGGGTGGCGTTCGAGCCCGTCTCCGAAGCAGGGGGAGCATCGGCGTAG

Protein sequence :
MARLLCDICGVRPATVRLAVLQNNQRQLLDVCDFHYAQLTRHQRSISPLEALFRAQASAREPSAADPHAAQQPVEGGESF
SIERHFSDVAMEMLQRAAETAAQFGRREVDTEHLLYVLADHAAVEAILASLGVKGSDLRAYIDANAEKREPAAPSPREPM
GVSPRLKSALDRAFLASRQLGHSSVGAEHLLIGLAEVPESFAGQLLGRLGVQAPALRQQTLRAAGVQKPSAPRQPSRTPQ
LDKHSRDLTVLAREGRLDPVIGRSSEIETMVEVLARRRKNNPVLIGEPGVGKTAVVEGLAQRMVNGDVPESLRNKRLVEL
NVNSIVAGAKYRGEFEERVKQVIDEVLENQDSLVLFVDEVHTIVGAGQGGGEGGLDIANVFKPPMARGELNLIGATTLAE
YQKYIEKDAALERRFQPVLIAEPSVVQTINILRGLRDRLEAHHKVTIQDDAIVGAAELSDRYISGRFLPDKAIDLIDQAA
ARVNLSSTSRPAAVLELEAEIGQLRREQDYAASRKQFDRAHALGGEITAKEEQLRDSTDAWKKNIGTQTSHVGIEQVAEI
VARLTGIPVAQLTAEEKERLLNMEQRLHQRVIGQDEAVVAVSDAVRRARAGLQARHRPTAVFLFLGPTGVGKTELAKALA
EVVFGDEDAMLRFDMSEYMERHTVARLIGSPPGYVGYEEGGQLTERVRRRPYCVILLDEIEKAHPDVYNVLLQVFDDGRL
TDGKGRVVDFSNTLIIATSNLASDVITGQNRTGPGFFSQAGSVSVESGVMNVLRQHFRPEFLNRIDDIIVFKSLGRDETR
HIVRILLEQVRRIASSQDIELSFDDSLVDHVATEGYRPEFGARELRRQIQQRVENPLAKALINGEIGEGMRVVCRYDSQE
QRVAFEPVSEAGGASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-163 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1002_1246 YP_003604841.1 ATPase AAA VFG0079 Protein 0.0 50