Gene Information

Name : BC1002_1231 (BC1002_1231)
Accession : YP_003604826.1
Strain :
Genome accession: NC_014117
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1375737 - 1376501 bp
Length : 765 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1297 short chain dehydrogenase

DNA sequence :
ATGCAACGCTTGACAGGAAAAGTCGCTATCGTCACCGGCGCCAGCGCGGGCATTGGTCGCGCTGCCGCAAAGTTGTTCGC
CGCGGAAGGCGCGAAGGTCGTAGTGGCCGCACGCCGCGAAGCCGAACTCGAGACGCTGGTCAGCGAGATCGCTCGCGACG
GCGGTACCGCTGTCGCGCTGGCGGGGGACGTGCAATCCGAAGAATTCGCGAAAGCGCTGGTCGCACTCGCCGTCAGCCGT
TTCGGCCGTCTCGACATCGCGTACAACAATGCGGGGACGCTCGGTGAGATGGGACCGTCGACCGGCGTGTCGGAAGCAGG
CTGGTCAGCGACGCTGGCCACCAACCTGACCAGCGCGTTTATCGGCGCCAAACATCAGATTCCTGAAATGATCAAGCAAG
GCGGCGGATCGATCATCTTCACGTCGACGTTCGTCGGCTACTCGTTCGCGTTCCCGGGGACGGCCGCCTATGCCGCGAGC
AAAGCCGGGCTGATCGGACTCACGCAAGCGCTCGCGGCCGAATACGGCGCGCAAGGCGTGCGTGTCAACGCGATCCTGCC
GGGCGCGGTGGACACGGAGATGTATCGCGGCATGAACGATACGGCTGAATCGCAGAGCTTCGTGACCGGACTGCACGCGC
TCAAGCGGGTCGCAAAGCCGGAAGAGATTGCCCGCTCGGCGCTGTACCTCGCTTCCGACGATTCGTCCTTCGTGACGGGC
ACGGCTTCGTTGGTCGACGGTGGGGCTTCGATTACGCGCACCTGA

Protein sequence :
MQRLTGKVAIVTGASAGIGRAAAKLFAAEGAKVVVAARREAELETLVSEIARDGGTAVALAGDVQSEEFAKALVALAVSR
FGRLDIAYNNAGTLGEMGPSTGVSEAGWSATLATNLTSAFIGAKHQIPEMIKQGGGSIIFTSTFVGYSFAFPGTAAYAAS
KAGLIGLTQALAAEYGAQGVRVNAILPGAVDTEMYRGMNDTAESQSFVTGLHALKRVAKPEEIARSALYLASDDSSFVTG
TASLVDGGASITRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-09 41