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Name : tkt (RIEPE_0218) Accession : YP_003603095.1 Strain : Candidatus Riesia pediculicola USDA Genome accession: NC_014109 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 219596 - 221599 bp Length : 2004 bp Strand : + Note : identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232 DNA sequence : ATGACTAATGACAGAACTTTTGCTAAAGCGATACGTTTTCTATGTGTGGATGCCATACAAAAAGCAAATTCTGGACATCC CGGAACTCCTATGGGAATGGCTGATATTGCAGCTGTTCTTTGGAAGAATTATTTAAATCATAATCCATCCGATCCTAATT GGATTAACAGAGATAGATTCGTATTATCAAACGGTCATGGCTCTATGCTGTTGTATAGTTTATTGCATCTGACTGGATAT GATTTATCTATCGAAGAAATAAAAAAATTTCGTCAATTTCAATCTCAAACTCCAGGTCATCCAGAATACGGGTCCACTCT AGGAGTGGAGACAACTACAGGACCTTTAGGACAGGGATTAGCTAATGCTGTTGGATTTGCAATGGCAGAAAAGATTCTTT CAAAAGAGTTCAATAGACCTAAATATCCTGTTATCGATCATTACACTTATGTTTTTGTGGGTGATGGATGTATGATGGAA GGCATTTCTCATGAAGTTTGTTCGTTAGCTGGAACTTGGGAACTAGGAAAGTTGATTGTTTTTTACGATAGTAATGGAAT TTCGATAGATGGTAAGGTGGAGCAATGGTTTACAGACGATACTGCTCTTCGATTTTCTTCCTATAAATGGCATGTTATTG ATAATATTGATGGACATAACATCGAACAAATCAAATCTTCTATTGATCAAGCTAAAAAAATTAAAAATCAACCCTCTTTA TTAATTTGCAGAACTGTTATTGGCTATGGATCCCCGATGTCAGGATCAGAAAAAATCCATGGTTCTCCAATTGGAAAGAG ATCTATAACTGAAATGAGAAGAAGATTGAATTGGAGATATGGAGAATTTGAAATACCCTCAAAATTGTATAAGTCTTTAG ATGCAAAGATTAGAGGCAACAAAATACAAAAAAAATGGTCCAATATGCTCTGCTCTTATAAAGAGCAGTTTCCAAAACTT TTTAAAGAATTAACTAGAAGAATTCAAAAAAAGTTACCGAAAGACTGGAAAAAAAGAACAGATGCGTTCATAGAATCGCT TCAAAAAAATCCTAAAGATATTTCTGGTAGACACGCTTCGAAAAAGACTTTAGAACTTCTTTATGATCTATTACCAGAAC TCCTAGGAGGATCCGCTGATTTAACGCCAAGCAACTTATCTAAATCTTCTTTAGCTAGATCGATTGATTGTAAATTTTCT GGAAATTATGTTCATTACGGAGCTAGGGAGTTTGGTATGTCAGCTATTATAAATGGAATCGCTATCTATGGAGGTTTTAT ACCATATGGAGCTACTTTTCTTACTTTTGTAGAGTATGCTAGAAATGCAGTAAGAATGGCTGCTCTGATGAAGATAAGGA GTATATTCGTTTATACACATGACTCTATTGGAGTAGGAGAAGATGGTCCTACTCATCAACCGATAGAGCAGTTAAATCAT CTTAGAACAACACCAAATATAAGTGTATGGCGACCTTGTGATCAAGTAGAATCAGCAGTATCTTGGAAATTGGCTGTAGA AAGAAAAAATAAACCAAGCGCTCTGATATTTTCTAGACAAACTCTTTTTCAGGAATATAGAGATAACGAACGGGTTTTAG AAATATCTAAAGGAGCATATATACTAAAGAAAAATAGTAACGATCCAGAATTGATTTTTATTGCGACTGGATCCGAGGTA AGACTGGCTATGGAATCATATTATATTCTGGACAAAGAAGGATACAAACTAAGAGTAGTTTCTATGCCATCTTCCGATGT TTTCGATCAACAAAGACTCTCTTATCGAAGAGAGATTTTATCTTCCAATATTTTTCATCATAAGATAGCTATCGAGGCTG GAAATACTAATTTTTGGCACAAATATGTTGGAGAAAGGGGTTTGGTTATTGGGATTGATTCCTTTGGATGTTCTGCTTCG GGAGATATCCTATTTGAGAAGATGGGGTTCACAGCTGCTAAAATCGTTGAAAAGGTAAAACGTATTTTAAAAAATAACGA TTAA Protein sequence : MTNDRTFAKAIRFLCVDAIQKANSGHPGTPMGMADIAAVLWKNYLNHNPSDPNWINRDRFVLSNGHGSMLLYSLLHLTGY DLSIEEIKKFRQFQSQTPGHPEYGSTLGVETTTGPLGQGLANAVGFAMAEKILSKEFNRPKYPVIDHYTYVFVGDGCMME GISHEVCSLAGTWELGKLIVFYDSNGISIDGKVEQWFTDDTALRFSSYKWHVIDNIDGHNIEQIKSSIDQAKKIKNQPSL LICRTVIGYGSPMSGSEKIHGSPIGKRSITEMRRRLNWRYGEFEIPSKLYKSLDAKIRGNKIQKKWSNMLCSYKEQFPKL FKELTRRIQKKLPKDWKKRTDAFIESLQKNPKDISGRHASKKTLELLYDLLPELLGGSADLTPSNLSKSSLARSIDCKFS GNYVHYGAREFGMSAIINGIAIYGGFIPYGATFLTFVEYARNAVRMAALMKIRSIFVYTHDSIGVGEDGPTHQPIEQLNH LRTTPNISVWRPCDQVESAVSWKLAVERKNKPSALIFSRQTLFQEYRDNERVLEISKGAYILKKNSNDPELIFIATGSEV RLAMESYYILDKEGYKLRVVSMPSSDVFDQQRLSYRREILSSNIFHHKIAIEAGNTNFWHKYVGERGLVIGIDSFGCSAS GDILFEKMGFTAAKIVEKVKRILKNND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 62 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 54 |
