Gene Information

Name : ECL_A265 (ECL_A265)
Accession : YP_003602758.1
Strain :
Genome accession: NC_014107
Putative virulence/resistance : Unknown
Product : IS2 transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 191189 - 191584 bp
Length : 396 bp
Strand : +
Note : -

DNA sequence :
ATGTCTAACACTAACACCAATTTTGAGATGACCGGGATCCTGTTAGGGCAAGAAGTCCGTAAACGTAAAACTCCTCAGGA
GAAGATCGCCATTATCCAGCAGACGATGGAGCCGGGTATGAATGTCTCCCATGTCGCCCGCCTGCATGGTATCCAGCCCA
GCCTGCTGTTTAAGTGGAAGAAGCAATATCAGGAAGGCAGCCTCACCGCCGTTGCGGCTGGAGAGGAAGTCGTTCCTGCT
TCTGAGCTTACTGCTGCTCTGAAGCAGGTCCGGGAGCTTCAGCGCCTTCTGGGCAAGAAGACGATGGAAGTTGAGATCCT
GAAAGAAGCCGTGGAGTACGGTCAGTCGCGAAAATGGATAGCGCACGCGCCCTTGTTGCCAAAGGACGGGGAATAG

Protein sequence :
MSNTNTNFEMTGILLGQEVRKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPA
SELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 2e-37 88
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-37 88
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-37 88
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 7e-40 76
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 7e-40 76
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 7e-40 76
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 1e-39 76
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 1e-39 76
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-39 76
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 9e-40 76
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 1e-39 76
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 3e-39 75
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 4e-39 75
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 4e-39 75
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 5e-27 66
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 2e-26 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_A265 YP_003602758.1 IS2 transposase orfA VFG0648 Protein 4e-40 76
ECL_A265 YP_003602758.1 IS2 transposase orfA VFG0622 Protein 1e-39 75
ECL_A265 YP_003602758.1 IS2 transposase orfA VFG0609 Protein 1e-39 75
ECL_A265 YP_003602758.1 IS2 transposase orfA VFG1733 Protein 4e-27 66