Gene Information

Name : ECL_A248 (ECL_A248)
Accession : YP_003602741.1
Strain :
Genome accession: NC_014107
Putative virulence/resistance : Unknown
Product : IS1 transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 178865 - 179242 bp
Length : 378 bp
Strand : -
Note : -

DNA sequence : 
ATGGACGAACAGTGGGGTTATGTCGGCGCTAAATCACGCCAGCGCTGGTTGTTTTACGCGTATGACAGGATACGGAGGAC
GGTTGTGGCGCACGTATTCGGTGAACGCACGTTGTCCACGCTGGAGCGTCTTCTGGGCCTGCTGTCGGCCTTTGAGGTCG
TGGTATGGATGACGGATGGCTGGCCGCTTTATGAATCACGCCTGAAGGGAGAACTGCACGTTATCAGCAAGCGATATACG
CAGCGCATTGAGCGGCATAACCTGAATCTGAGGCAACATCTGGCAAGGCTGGGCAGGAAGTCACTGTCGTTCTCAAAATC
GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA

Protein sequence : 
MDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYT
QRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 7e-46 98
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 7e-46 98
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 9e-45 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 2e-45 96
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 5e-45 96
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 4e-45 96
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 9e-45 94
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 3e-45 92
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 3e-45 92
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 3e-45 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_A248 YP_003602741.1 IS1 transposase orfB VFG0612 Protein 3e-45 94