Gene Information

Name : ECL_A141 (ECL_A141)
Accession : YP_003602636.1
Strain :
Genome accession: NC_014107
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 95497 - 95994 bp
Length : 498 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTGCTGGCGCAGCTCCCCAGATGTGCTTTGATCAGGCCGGGAAAGATTATCAAATTGATCCGCTGCTGCTTATGTC
AATTTCAATTAAAGAGAGCAGACTTAAGCCGGGTGCGATAAATGGATCAAACAGGAATGGAACAGAAGATGTCTGCGGGA
TGCAGGTGAACAGTTCCCATTACGGTAAACTTAAAAATTTCAATATTACCCGTGAGCGACTGTTGAATGATCCATGCATC
TGCGTTTATACGGGTGCATGGGTACTGGCGCACAACTTCAGGTCATACGGAAAAAACTGGGACAGCGTAGGGATGTATAA
TACGGGGCCGAGCAAAAAGCTCATTGCGCAGCGCAAGGCGTATGCTCAGGATATCAAAAATATATATCGTGTATTGCTGG
CCAGAAAAAAGCTACTTTCTGAACGTCTGGCGCCAGCTGCGGGAAAGGAGCATGCAATGCAAATTGCGGAAACGACCTCG
TTACATAGCGGGCAGTAA

Protein sequence : 
MSAGAAPQMCFDQAGKDYQIDPLLLMSISIKESRLKPGAINGSNRNGTEDVCGMQVNSSHYGKLKNFNITRERLLNDPCI
CVYTGAWVLAHNFRSYGKNWDSVGMYNTGPSKKLIAQRKAYAQDIKNIYRVLLARKKLLSERLAPAAGKEHAMQIAETTS
LHSGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06358.1 unknown Not tested LEE Protein 1e-18 46
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 7e-19 44
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 7e-19 44
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 7e-19 44
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 7e-19 44
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 3e-21 43
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 3e-21 43
unnamed AAC31524.1 L0045 Not tested LEE Protein 3e-18 41
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 5e-18 41
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 3e-18 41
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 5e-18 41
unnamed AAK26704.1 unknown Not tested LEE Protein 2e-18 41
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 3e-18 41
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 3e-18 41
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 2e-18 41
unnamed AAL57531.1 unknown Not tested LEE Protein 2e-18 41
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECL_A141 YP_003602636.1 lytic transglycosylase VFG0539 Protein 2e-19 44
ECL_A141 YP_003602636.1 lytic transglycosylase VFG0823 Protein 1e-18 41