|
Name : cbh (LCRIS_00906) Accession : YP_003601378.1 Strain : Lactobacillus crispatus ST1 Genome accession: NC_014106 Putative virulence/resistance : Virulence Product : choloylglycine hydrolase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3049 EC number : - Position : 905901 - 906878 bp Length : 978 bp Strand : - Note : - DNA sequence : ATGTGTACTTCAATTATTTTCAGTCCACAAGATCACTATTTTGGACGTAACCTCGATCTTGAGATTACTTTCGGCCAACA AGTTGTAGTTACCCCACGCAATTATACTTTCAACTTCCGCAAGATGCCTGAAATGAAGCATCATTATGCTATGGTTGGTA TTGCACTTGATGCTGGTAATTATCCGCTCTACTTTGACGCAGTTAATGAAAAAGGTTTAGGCATGGCAGGACTTAACTAC CCTGACAATGCTACCTACTATGATGAAGTTGCCAATAAAGACAACATTGCTTCATTTGAATTTATTCCCTGGATTCTGGG TCAATGCGCAACTGTAGCGGATGCTAAGGTATTACTTAAAAAGATCAACATTGTTAACCTTAATTTCTCTGACAAGATGC AGGCATCCCCACTTCATTGGTTAATTGCCGATAAGACAGGTGTTTCAATTGTCGTTGAAACCGATAAAGATGGAATGCAC GTTTATGATAATCCTGTCGGTTGCCTGACTAACAATCCTCAGTTTTCATGTCAATTATTTAATTTAAATAATTATGCTGA TGTTTCACCTGCAATGCCTAAGAACAACTTTTCAAAAGAGGTCAATATGAATGGCTACAGCCGTGGGCTTGGTTCACGCA ATTTGCCAGGTGGGATGGATTCAGAATCGCGCTTTGTTCGTGTAGCTTTTAACAAGTTCAACGCTCCTGTTGGTAAAAGT GAGGAAGAAAACGTAGACAATTACTTCCATATTTTGCATTCTGTTGAACAACAAAAGGGACTTGATCAAGTTGGCCCTAA TTCATTTGAATACACTATTTACTCTGATGGTACCAACCTTGACAAAGGGATTTTCTATTACACTACTTATACTAATCAGC AAATTAATGTCGTTGACATAAACAAAGAAGACCTCGATGCTAAGGATTTAATCAAGTATGATATGTTAACTAAGCCAACA TTTAATCACCAAAACTAA Protein sequence : MCTSIIFSPQDHYFGRNLDLEITFGQQVVVTPRNYTFNFRKMPEMKHHYAMVGIALDAGNYPLYFDAVNEKGLGMAGLNY PDNATYYDEVANKDNIASFEFIPWILGQCATVADAKVLLKKINIVNLNFSDKMQASPLHWLIADKTGVSIVVETDKDGMH VYDNPVGCLTNNPQFSCQLFNLNNYADVSPAMPKNNFSKEVNMNGYSRGLGSRNLPGGMDSESRFVRVAFNKFNAPVGKS EEENVDNYFHILHSVEQQKGLDQVGPNSFEYTIYSDGTNLDKGIFYYTTYTNQQINVVDINKEDLDAKDLIKYDMLTKPT FNHQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0521 | NP_814299.1 | choloylglycine hydrolase | Not tested | Not named | Protein | 4e-88 | 56 |
| ef0040 | AAM75246.1 | EF0040 | Not tested | Not named | Protein | 3e-88 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cbh | YP_003601378.1 | choloylglycine hydrolase | VFG2162 | Protein | 2e-92 | 58 |
