Gene Information

Name : LCRIS_00751 (LCRIS_00751)
Accession : YP_003601223.1
Strain : Lactobacillus crispatus ST1
Genome accession: NC_014106
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 752869 - 753591 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTTTGAGAATATTAATGGTCGAAGATGACACTTCCGTAGCTGAAATGATGGGAATGTTTTTCAAAAAAGAAGGTTG
GCAACAAGACATTGCTGTCGATGGTGTCGAAGCCGTCGATATGTTTAAAAAGAACGCGGATAAGTATGATCTGATTACGT
TAGATTTGAATTTGCCAAAAAAAGATGGGATTCAAGTAGCTAAAGAGGTACGGGCAATTTCGCCGACAGTGCCAATTATT
ATGCTTACTGCTCGTGGCAGTGAATCAGATCAAGTGTTGGGGCTAGGTATCGGAGCTGATGAGTATGTCACTAAGCCATT
TAGCCCAATTGCTTTGATTGCCCGCATTAAGGCTTTGCATCGCCGCGTGATGATGGAAGAAGAACCAGCTCATACTCAAG
AAGATAATCAAGACTATGAGATTACTACCGATCATTTGAAGATTTCAAAAAATAGACGAGAAGTTTTATTTGATAATCAG
CCGGTAATGGGTTTGACACCAAAAGAATTTGATTTGCTGTATACAATGGCACAAAAGCCTAGACAAGTCTTTTCTCGTGA
CCAATTACTAGAACTAGTTTGGGGCTATGAGTATTATGGTGAAGAAAGAACTGTTGATGCTCATATTAAAAAGCTTCGAC
AGAAATTAGAGAAGGTTGGTGCCAAGGTGATCCAAACTGTCTGGGGCGTCGGTTACAAGTTTGATGATTCGCAGGTCAAA
TAA

Protein sequence : 
MSLRILMVEDDTSVAEMMGMFFKKEGWQQDIAVDGVEAVDMFKKNADKYDLITLDLNLPKKDGIQVAKEVRAISPTVPII
MLTARGSESDQVLGLGIGADEYVTKPFSPIALIARIKALHRRVMMEEEPAHTQEDNQDYEITTDHLKISKNRREVLFDNQ
PVMGLTPKEFDLLYTMAQKPRQVFSRDQLLELVWGYEYYGEERTVDAHIKKLRQKLEKVGAKVIQTVWGVGYKFDDSQVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-35 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCRIS_00751 YP_003601223.1 response regulator CP001918.1.gene5135. Protein 4e-25 43
LCRIS_00751 YP_003601223.1 response regulator FJ349556.1.orf0.gene Protein 8e-40 42
LCRIS_00751 YP_003601223.1 response regulator NC_002952.2859905.p0 Protein 1e-40 42
LCRIS_00751 YP_003601223.1 response regulator NC_002951.3237708.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator NC_007622.3794472.p0 Protein 1e-40 42
LCRIS_00751 YP_003601223.1 response regulator NC_002758.1121668.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator NC_009641.5332272.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator NC_013450.8614421.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator NC_007793.3914279.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator NC_003923.1003749.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator NC_002745.1124361.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator NC_009782.5559369.p0 Protein 9e-41 42
LCRIS_00751 YP_003601223.1 response regulator AE000516.2.gene3505. Protein 2e-35 42
LCRIS_00751 YP_003601223.1 response regulator HE999704.1.gene2815. Protein 7e-40 42
LCRIS_00751 YP_003601223.1 response regulator AF155139.2.orf0.gene Protein 5e-41 41
LCRIS_00751 YP_003601223.1 response regulator NC_012469.1.7685629. Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCRIS_00751 YP_003601223.1 response regulator VFG1563 Protein 2e-35 42
LCRIS_00751 YP_003601223.1 response regulator VFG1702 Protein 2e-35 42