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Name : clpE1 (LCRIS_00649) Accession : YP_003601121.1 Strain : Lactobacillus crispatus ST1 Genome accession: NC_014106 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 649783 - 651975 bp Length : 2193 bp Strand : - Note : - DNA sequence : TTGCTTTGCCAAAATTGTCATGAGCGGCCCGCTTCTATTCACCTTTTCACTAAGGTTAATGGTCAAAGCCGCGAAATAGA TTTATGTCAACACTGTTATCAAGAATTAAAAAATCAACAAGGAAATCAAGGAAAAATGAATAATAATGAATTTTTTGGCG ACTTTGATGATTTATTCAACGCATTAAACGGAAATAACAACAATGCCGCAAACAATAATAATGAAATGAGAAATAACGAC CCTAGAATGCAAATGGGGGGAGGCGCTGGTAATGGTGGTCAAAACGGCAGAAGCCTACTTGACCAATACGGAACAGACTT AACTGCCCTTGCTAAAAAAGGCAAAATTGACCCAGTAATCGGTCGTGATAAAGAGATTGCTCGGGTTATCGAAATTTTAA ATAGAAGAACTAAGAACAACCCTGTTTTAATCGGTGAAGCGGGTGTTGGTAAGACTGCCGTTGTCGAAGGCTTAGCTCAA GAAATCGTAGATGGATCAGTACCAGCAAAATTGCAGAACAAACGAATTATTTCATTAAATGTTGTTTCACTTGTTCAAGG TACCGGTATTCGTGGTCAATTTGAACAAAGAATGGAACAATTAATTAAAGAATTACAACAAAACGACGATATCATTCTTT TTATTGATGAAATTCACGAAATCGTTGGTGCCGGTAATGCTGAAGGTGGCATGGATGCCGGTAACATTATTAAGCCAGCT TTGGCTCGTGGCGAATTGCAATTAGTTGGTGCTACTACCATCAAAGAATACCGCGATATTGAAAAAGACTCTGCTTTAGC TAGACGTTTTCAACCAGTTGAAGTTAAAGAACCTTCAATTGACGAAACAATTCGCATCTTAAAAGGTATTCAAAAACGCT ACGAAGACTATCACCATGTTCACTACACTGATGAAGCCATTGAAGCTGCCGCAAAACTTTCAGCACGTTATATTCAAGAT AGATTTTTACCAGACAAGGCTATTGACCTTCTTGATGAAGCAGGTTCTAGAATGAACTTAACCATTCCTTATATTGATAA GGATAAAATGCAAGAAAGAATTAATGCCGCAGAGCAATTGAAGGAAGAAGCCTTAAAAAACGAAGATTACGAAAAAGCAG CCTACTACCGTGATCAAATTGAAAAATATGAAAAGGTTAAAGATCAAAAGGTAGATCCTGACAAGTCCCCTGTTATTACT GATAAGATCATGGACAAGATCGTAGAAGAAAAAACAGGCATTCCTGTTGGTGATATTCAAAAGCAAGAAGAAAACCAACT GCAAAATCTAGCTGCTGATTTAAAGGCTCACGTTATCGGCCAAGACAAGGCTGTTGAAAAAGTAGCTCGTGCCATTCGTC GTAACCGAATCGGTTTCAACAAGTCAGGCCGTCCAATTGGTTCATTCCTCTTCGTTGGTCCAACTGGTGTCGGTAAAACT GAGTTAGCTAAGCAACTGGCTAAGCAAATGTTTGGCTCAGAAGATGCAATGATTCGTTTCGATATGTCTGAATACATGGA ACAATACTCAGTTTCCAAATTAATTGGTTCTGCTCCAGGTTACGTAGGCTACGAAGAAGCTGGTCAATTAACTGAACAAG TTAGACACAACCCATATAGTTTGATCTTGCTTGATGAAATTGAAAAAGCTCACCCAGATGTTTTGAACCTCTTCTTGCAA ATTCTTGACGATGGTCGTTTAACTGACTCACAAGGTAGAACAGTTTCATTCAAGGATACCATCATTATTATGACTTCTAA TGCAGGACAAGGCATTAAGAACGCTAGCGTTGGCTTTACAGCAGAAAACGAAGATGAAGCTAATGAATCTGCTAGAAATA ATATGAGCCAATTCTTTAAGCCAGAATTCTTGAACCGTCTTGATGATGTAATCGAATTTAATGAATTGACTAAGCCAGAC TTGCTTAAGATTGTTGACTTAATGTTGCAAAATACCAACAATATGGTTAAGGATCAAGGCCTACACATTGATGTAACTGC TGCTGCAAAAGATAAATTAGTTGAAGATGGCTTTAATCCTGCCTTAGGTGCTCGTCCTCTTCGTCGTACCATCCAAGAAG AGATTGAGGATAATGTGGCTGATTTCAAACTTGATCATGCACAGGCTAAGAATTTAAAAGCCGATGTTGTTGATGGTAAA ATTGTAATCAGTGATGAAGCAAATAATGAATAG Protein sequence : MLCQNCHERPASIHLFTKVNGQSREIDLCQHCYQELKNQQGNQGKMNNNEFFGDFDDLFNALNGNNNNAANNNNEMRNND PRMQMGGGAGNGGQNGRSLLDQYGTDLTALAKKGKIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQ EIVDGSVPAKLQNKRIISLNVVSLVQGTGIRGQFEQRMEQLIKELQQNDDIILFIDEIHEIVGAGNAEGGMDAGNIIKPA LARGELQLVGATTIKEYRDIEKDSALARRFQPVEVKEPSIDETIRILKGIQKRYEDYHHVHYTDEAIEAAAKLSARYIQD RFLPDKAIDLLDEAGSRMNLTIPYIDKDKMQERINAAEQLKEEALKNEDYEKAAYYRDQIEKYEKVKDQKVDPDKSPVIT DKIMDKIVEEKTGIPVGDIQKQEENQLQNLAADLKAHVIGQDKAVEKVARAIRRNRIGFNKSGRPIGSFLFVGPTGVGKT ELAKQLAKQMFGSEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQVRHNPYSLILLDEIEKAHPDVLNLFLQ ILDDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKNASVGFTAENEDEANESARNNMSQFFKPEFLNRLDDVIEFNELTKPD LLKIVDLMLQNTNNMVKDQGLHIDVTAAAKDKLVEDGFNPALGARPLRRTIQEEIEDNVADFKLDHAQAKNLKADVVDGK IVISDEANNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-153 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE1 | YP_003601121.1 | ATP-dependent clp protease, ATP-binding subunit | VFG0080 | Protein | 0.0 | 58 |
| clpE1 | YP_003601121.1 | ATP-dependent clp protease, ATP-binding subunit | VFG0079 | Protein | 9e-157 | 52 |
