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Name : LCRIS_00512 (LCRIS_00512) Accession : YP_003600984.1 Strain : Lactobacillus crispatus ST1 Genome accession: NC_014106 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 509937 - 511652 bp Length : 1716 bp Strand : - Note : - DNA sequence : ATGTATCAAAATTATACCATAGGTCAAACAGCTTTAACACTCAACTTAGACTTCGCTATTCCTCATAATCATTTGGCTAA TACCATTAGCTGGTTTGTCGATTCAATTCCAGAAGATGTCTTATTGGGTAATACTGCTAAAACGGGTCGTCCAGCTTATC ATCCAGCGATGATGCTTAAAATCTTGCTTTTTGCTTATTCCAGAAGAGTATTTTCAGGCAGAAAAATCGAATTAATGCTG GAAGAAAACGTGCCGATGATGGCTTTGGCTGAACACCAACAGATTTCTTACCATACTATCAATAACTTTAGATCCAGCAA GCATGCCAATGAGCTGGTTAAGAAAAGCTTCCTCTACTTTACCAATTTGTTAGAAGCCGAGGGCCTTATCAATGAAGGAG CGATCTTTATTGATGGCACTAAAATCGAAGCTGACGCCAATCGCTATACTTTTGTTTGGCGCAAGGCAGTTGAAAAATTT CATGACAAGCTCAAAGGTCAAGCGGTTGAGCTTTATGATGAATTGATTGCCAAAGAAGTCGTCAAAGCAATGGCAAAAGA GAAAGTCCAGACCAGTCAAGGTTTGGCAGAGCTAGCACAAGAAACGGAAGCCGAGATTGAAAAGCTGACCGAAGAAATTG AGCAAGAACCCAAAGCAATCCCTGGCGGTTCGCCTAGAAAAGCAAGAAGACGCGGTCTTAAAAAGCTGCTTCATAAACTA AGAAAAGACTATGTTCCTCGAATGAAGAAATATGAAGAGGCGAAAGAAATCTTTGCAGGGCGTAACAGCTATTCTAAGAC AGATCATGACGCAACTTTCATGCATATGAAGGAAGATCACATGAAGAACGGCCAGCTCAAGCCAGGCTACAATATTCAAG CCGCCACCACTGATCAATATGTGGTTGACTTTGCTTTATACCCTAATCCAACTGATTTCAGAACTTTCGAACCATTTTTA AAGCAGATGACGACACTAGACAAGTTTGACAAGATTGTCGCTGATGCTGGTTATGGCAGCGAATATAATTATTCAATGTT AGAAGAAGAGTATTCAGACAAGAAGTACTATATTCCTTATACCATGTACGAAAAGGAAAAGACCAGAAAGTATCGCAACG ATCCAACTAAGCTGGCTAACTGGTTCTATGATGAAAAAGATGATTATTACCTTGATCAAAATGGCGTCAGATTCAACTTC AAATATTATAGTCAACGTAAAGATCGATCGACTGGTCAGGTTCGTGATTTTAAGGTCTATGAAGCAGATGAATTTCAACT AACGCCAGAATTAGAACGCTTAGCCAAGACTAAGAGCGGACGCCAACGTCAGGTTCGCTATAATCCTAACTGGCAATACC TAAAAGAAAAAGCCAAAGCAGTTCTCCAAAGTCCTGAAGGCAGACACATCTACAGCATGAGGAAATATGATGTGGAGCCG ATTTTTGGACATTTGAAGAACGTCTTTGGCATGCGCCGAACTCATTTAAGAGGCAAAAAGAAGGTTGAAACAGATATAGG AATAGCCTTCATGATGATGAATTTAAGCAAATATTGGAACAGAAGATGGTCAAAAGACCAATTTTCTTTGTTCAAAAATA AAAATAGACAGAAAAAGACGGTCAAGCAACTCAAATTAAGAGTTGGATTGATCGTCTTTCAGTATCTAAGGGTTAGTTTT TTCCCAGACACTTTTTCGGGTTGGGTGTTCTTTTAG Protein sequence : MYQNYTIGQTALTLNLDFAIPHNHLANTISWFVDSIPEDVLLGNTAKTGRPAYHPAMMLKILLFAYSRRVFSGRKIELML EENVPMMALAEHQQISYHTINNFRSSKHANELVKKSFLYFTNLLEAEGLINEGAIFIDGTKIEADANRYTFVWRKAVEKF HDKLKGQAVELYDELIAKEVVKAMAKEKVQTSQGLAELAQETEAEIEKLTEEIEQEPKAIPGGSPRKARRRGLKKLLHKL RKDYVPRMKKYEEAKEIFAGRNSYSKTDHDATFMHMKEDHMKNGQLKPGYNIQAATTDQYVVDFALYPNPTDFRTFEPFL KQMTTLDKFDKIVADAGYGSEYNYSMLEEEYSDKKYYIPYTMYEKEKTRKYRNDPTKLANWFYDEKDDYYLDQNGVRFNF KYYSQRKDRSTGQVRDFKVYEADEFQLTPELERLAKTKSGRQRQVRYNPNWQYLKEKAKAVLQSPEGRHIYSMRKYDVEP IFGHLKNVFGMRRTHLRGKKKVETDIGIAFMMMNLSKYWNRRWSKDQFSLFKNKNRQKKTVKQLKLRVGLIVFQYLRVSF FPDTFSGWVFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 4e-71 | 41 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 4e-71 | 41 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 4e-71 | 41 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 3e-71 | 41 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 1e-68 | 41 |
