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Name : clpC (LCRIS_00290) Accession : YP_003600762.1 Strain : Lactobacillus crispatus ST1 Genome accession: NC_014106 Putative virulence/resistance : Virulence Product : atpase aaa-2 domain protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 302356 - 304836 bp Length : 2481 bp Strand : + Note : - DNA sequence : ATGGAAAATTCATATAGTAAGAGCGTTAATCAAGTATTGAAAATTGCACGTGAACAAGCACAAAATTTTCATCATCGCTT GATCGGCACAGAACATGTTTTATTGGCTTTAGTAATTGAAACTGACGGTGAAGCAGGAAAAATCTTGCGTTCATGGGGCT TAACACCAACTGCAGTACGTGAAGAGATTGAGCGTTATACCGGTTATGGCTCTGCCCCTAAGACAAGCTACATGGAAATG TCACCACGTTTGAGCTTGGCTCTAGATTATGCTAGAAGACGAGCCAATGATGATGGAGTTAAAGAAATTAATACTAATCA TGTTTTGCTGGGAATTACTGCAAGTGAGCAGGTTTTATCAGCAATGATTTTGAAAAACTTGAATGTTGATATTCCTCGTC TGCAGCAGGATGTTGAAGACAGTTTGAGTCAAGACCAAGACTTTGGTGATTCAGCTAATTGGCTGGGTGATGATAACACG ACGACTGGTCAAAAGAAGCGCAAGAGCACTACTCCTAACTTAGATAAGGTAGCGGTTAATTTAAATCAACGTGTGCGTAA TGGCGAGATTGATCCGGTGATTGGCCGTGACCAAGAAATTAAGCGTGTGATTCAAATTTTGTCTCGACGGACTAAGAATA ATCCTGTCTTAGTTGGTGAACCAGGAGTTGGTAAGACTGCTGTTGCTGAAGCGATTGCAACTGAGATTGTCAACAAAAAA GTGCCACAGGATATGCTTAAGAAACGGGTAATGGCCTTAAATTTAGGTAGTTTAGTTGCTGGGACTAAGTATCGTGGTGA GTTTGAAGACAGAATGAAGAAAATCCTGAACGAAGTCACCAAGGATGGCAATGTCATTCTCTTTGTTGATGAAATGCATA CTTTAATTGGTGCTGGTGGTGCTGAAGGTGCAATTGATGCTTCTAATATCTTGAAGCCTTCGCTTGCTCGTGGCGATATT CAAATGATTGGTGCAACTACTTTTAATGAATATCAAAAGTACATTGAAAAAGATCAAGCTTTGGCACGTCGTTTTCAACA AGTGCGCTTAAGTGAGCCTTCAAGAGATGATACTTTGACAATTATGCGTGGCTTGAAGTCGAAATATGAAAAGTTCCATC ATGTGACTATTTCTGATGAGAGCTTGAAGGATGCAGTTGATTTGTCAACGCGCTATATTTCGGATCGCTTTTTGCCAGAT AAGGCGATTGACTTAGTAGATGAAGCTGGTGCCGCTGTTAAGATTCGCAATAATGTTGGCAATGATGCTAAGCTGGAAAA GATTAATGAGCAGATAAAGGAAATTATTGCGCAAAAGAATGAAGCTGCCGCTAGTCAAAATTTTGTTAAGGCTGCTCAAT TGCAAGATCAACAAAATAATCTGCAAATGCAACGCGAAGCAATGGTTGAAAAACTTGAGGATAAGGTTAGCGCTAAAGCA GTAGTTGAACCTGAAGATATTGCTAAAGTTGTCTCTGAATGGACTGGTGTGCCAGTTACTCAGATGAAGCGCAATGAATC ACGTCAATTGGCTAACTTGGAAAAGATTTTGCATCAACGTGTTATTGGACAAGATAAAGCTGTTTCAGCGGTTGCTCGGG CAATTCGTCGTAGCAGAAGTGGAATTAAAGATGAACGTCGGCCGATTGGATCCTTCTTATTCTTAGGACCAACCGGTGTT GGGAAGACAGAACTAGCTAAGTCAGTTGCAGCAGCAATGTTTGGTTCAGAAGATAATTTGGTCAGATTAGACATGTCTGA ATATATGGACCAAATTGCTTCAAGCAAATTAATTGGCTCGGCACCAGGTTATGTCGGTTATGAAGAAGGCGGTCAATTAT CTGAAAAGGTTCGTCGTCATCCGTACTCGGTTATTTTGCTTGACGAAGTAGAAAAAGCTCATCCAGATGTCTTTAACTTG CTTTTGCAGGTTTTAGATGAAGGATTTTTGACTGACTCCAAAGGTAGAAAAGTCGACTTTAGAAATACAATTATAATCAT GACTTCTAATTTAGGTTCTCGTTCGCTCTTTGATAATAAGGCAGTCGGCTTCAATGCAGATAATGTAGATCCAGCCAAGG CGAGATCAGCTAAAGTTGAACAAGCAATCAAACAATTCTTCCGCCCAGAATTTTTAAACAGAATCGATGAAACTATTATC TTCGATGAACTAGATAAGAAGCAGCTGCGCAATATTGTAACTTTGTTAACGCACAAGCTGGTAGTTCGTTTGCAAAAGAA GGGTATCGAATTGAAGCTATCACGGGCAGCACTGGATCAGATTGCACAAGATGGTTATGATCCAGAAAATGGTGCTCGAC CATTGAGAAGAGCAATTCAAAATGATATTGAAGACAAGATTGCCGAGATGTTGATTGTAGGCGAAATTAAGTCAGGCGAC ACTTTGAAAATTGGTAGTCAGCATGGACATTTGAAATTTGAAGTAGTTAATCCGAAAAAAGAAACTGTAAAAGTCAAGTG A Protein sequence : MENSYSKSVNQVLKIAREQAQNFHHRLIGTEHVLLALVIETDGEAGKILRSWGLTPTAVREEIERYTGYGSAPKTSYMEM SPRLSLALDYARRRANDDGVKEINTNHVLLGITASEQVLSAMILKNLNVDIPRLQQDVEDSLSQDQDFGDSANWLGDDNT TTGQKKRKSTTPNLDKVAVNLNQRVRNGEIDPVIGRDQEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAEAIATEIVNKK VPQDMLKKRVMALNLGSLVAGTKYRGEFEDRMKKILNEVTKDGNVILFVDEMHTLIGAGGAEGAIDASNILKPSLARGDI QMIGATTFNEYQKYIEKDQALARRFQQVRLSEPSRDDTLTIMRGLKSKYEKFHHVTISDESLKDAVDLSTRYISDRFLPD KAIDLVDEAGAAVKIRNNVGNDAKLEKINEQIKEIIAQKNEAAASQNFVKAAQLQDQQNNLQMQREAMVEKLEDKVSAKA VVEPEDIAKVVSEWTGVPVTQMKRNESRQLANLEKILHQRVIGQDKAVSAVARAIRRSRSGIKDERRPIGSFLFLGPTGV GKTELAKSVAAAMFGSEDNLVRLDMSEYMDQIASSKLIGSAPGYVGYEEGGQLSEKVRRHPYSVILLDEVEKAHPDVFNL LLQVLDEGFLTDSKGRKVDFRNTIIIMTSNLGSRSLFDNKAVGFNADNVDPAKARSAKVEQAIKQFFRPEFLNRIDETII FDELDKKQLRNIVTLLTHKLVVRLQKKGIELKLSRAALDQIAQDGYDPENGARPLRRAIQNDIEDKIAEMLIVGEIKSGD TLKIGSQHGHLKFEVVNPKKETVKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-169 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003600762.1 | atpase aaa-2 domain protein | VFG0079 | Protein | 0.0 | 51 |
| clpC | YP_003600762.1 | atpase aaa-2 domain protein | VFG0080 | Protein | 5e-143 | 51 |
