Gene Information

Name : LCRIS_01887 (LCRIS_01887)
Accession : YP_003602359.1
Strain : Lactobacillus crispatus ST1
Genome accession: NC_014106
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 1902263 - 1903135 bp
Length : 873 bp
Strand : -
Note : -

DNA sequence :
ATGATTATCAAGCTTTATTCCAAGGGCGTGACCACCAGGGAAATAGCCGATCTAATTGAAAAAATGTATGGCAGCCATTA
CAGTCCAGCTCAAGTATCAAATATTTCCAAGCAGATGATTCCAAAGGTTGAGGCTTACCACAAACGCAAGCTAAGCGACA
AGTTTTTCTGCGTCTATTTGGATGCGACATACCTTCCTTTGCGCCGAGAAACATTTGAGCGTGAAGCAGTCTATATTGCC
ATTGGCATCAAGCCTAATGGACACAAGGGGGGCATTGACTACTGCATTGCGCCTAGCGAGAACATTGAAATCTGGACAGA
TATGCTTCAAAACATGAAATCCCGAGGCTTAAAGCAAGTTGAGCTTTTTCTTTCTGATGGTGTTGTTGGCATGAAAACAG
CCTTGGCCAGTACTTATCCTAAAGCTCATTTTCAACGCTGTTTGGTTCATGTCATGCGCAATATCTGCGCTAAAGTACGC
GTCGACGATCGTGAAAAGATCATGAACGAATTCAAACAGGTGCATCAACAGACAAATAAAGAAGAAGCCACAGCTGTCCT
GCATGACTTCTATACCAAATGGGGCAAGGTTTACAGCCATGTTATCAGAAGCTTGAAAGACATAGAACCAGATCTGCTGG
TCTTTTATAACTATCCCAAGCAGATCAGAGCTTCAATTTATTCGACTAACATGATTGAATCATTTAACAATGTGATCAAG
CGCAAAGCTAAGCCTAAGGCAGAGTTTCCAACTGAACAGTCGCTTGATGCTTTTATTGGTATTCAGGCAATGAGCTACAA
TGACCGTTATTTCAATCGAATTCATAAAGGTTTTGGTCAGGTTCAGGACACCTTAGAATCCTACTTTGATTAA

Protein sequence :
MIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHKRKLSDKFFCVYLDATYLPLRRETFEREAVYIA
IGIKPNGHKGGIDYCIAPSENIEIWTDMLQNMKSRGLKQVELFLSDGVVGMKTALASTYPKAHFQRCLVHVMRNICAKVR
VDDREKIMNEFKQVHQQTNKEEATAVLHDFYTKWGKVYSHVIRSLKDIEPDLLVFYNYPKQIRASIYSTNMIESFNNVIK
RKAKPKAEFPTEQSLDAFIGIQAMSYNDRYFNRIHKGFGQVQDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0035 AAM75241.1 EF0035 Not tested Not named Protein 9e-52 50
unnamed AAM21184.1 transposase Not tested Not named Protein 4e-71 50
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 4e-71 50
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 7e-71 50
unnamed AAM21176.1 transposase Not tested Not named Protein 4e-71 50