Gene Information

Name : LCRIS_01306 (LCRIS_01306)
Accession : YP_003601778.1
Strain : Lactobacillus crispatus ST1
Genome accession: NC_014106
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, atpase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1311823 - 1312569 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :

ATGTCAGAAATTTTAAGAGTGGATCAAGTAACTAAGACTTATGGTAAAAAAGGTGAGAAGCAATACCAAGCTTTAAAAGG
AATTAGCTTTGCCATTGAACAAGGTGAATTCGTTGGCATTATGGGTGCTTCTGGTTCAGGAAAGACAACTTTATTGAATA
TCTTGTCGACGTTAGATAAGCCAACTAGTGGACATGTTTTAGTCAATAAGCAAGACATTACTGCACTTAAGAACAATCAA
ATGGCAGATTTTCGCGGAAAAGAAATTGGCTTTATTTTTCAAGATTTCAACTTGCTAGATAATTTGACTAATCGCGAGAA
TATAGCCTTGCCATTATCGCTTCAAGGAGTGAAGGCAAAGGAGATTGACGGAAAAGCAATGGCGATTGCCAAAAGATTGG
GAATAGAATCTATCTTGGACAAATATCCAGCTGAAATTTCTGGTGGTCAAAAACAGCGTGTTGCTTCAGCTCGAGCATTG
GTCCATAATCCGGCAATTTTATATGGTGATGAACCTACAGGAGCTTTAGATTCACAATCAGCTACGGAATTATTGAAAAC
AATGGCAGACTTGAATAAGAATGATCAAGTTTCGATTCTGATGGTAACGCATGATCCTTATTCAGCTTCTTACGCTCAAA
GAATTTTGTTCATCAAAGATGGAAAAATCGGCAAAGAAATTAAAAAAGAAAATAAAACCAGAGAAGAATTTTATCAAGAT
ATTATTGCTGAATTAGGTAGACGTTAG

Protein sequence :

MSEILRVDQVTKTYGKKGEKQYQALKGISFAIEQGEFVGIMGASGSGKTTLLNILSTLDKPTSGHVLVNKQDITALKNNQ
MADFRGKEIGFIFQDFNLLDNLTNRENIALPLSLQGVKAKEIDGKAMAIAKRLGIESILDKYPAEISGGQKQRVASARAL
VHNPAILYGDEPTGALDSQSATELLKTMADLNKNDQVSILMVTHDPYSASYAQRILFIKDGKIGKEIKKENKTREEFYQD
IIAELGRR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-34	43
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-34	43
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-34	43
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-34	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LCRIS_01306	YP_003601778.1	ABC-type antimicrobial peptide transport system, atpase component	NC_008702.1.4606598.	Protein	1e-33	45
LCRIS_01306	YP_003601778.1	ABC-type antimicrobial peptide transport system, atpase component	CP001581.1.gene598.p	Protein	7e-36	43
LCRIS_01306	YP_003601778.1	ABC-type antimicrobial peptide transport system, atpase component	NC_012469.1.7686878.	Protein	3e-40	43
LCRIS_01306	YP_003601778.1	ABC-type antimicrobial peptide transport system, atpase component	CP001581.1.gene798.p	Protein	7e-36	42