Gene Information

Name : LCRIS_00118 (LCRIS_00118)
Accession : YP_003600590.1
Strain : Lactobacillus crispatus ST1
Genome accession: NC_014106
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 117568 - 118746 bp
Length : 1179 bp
Strand : +
Note : -

DNA sequence :
ATGAATGATTTTACCAAAGATATGACTAATGCTCTATTCAATCAGGATAAAATTAATGATTTATTTAGACAAAAGCTCCA
ACAGGCTGTCAATGACCTGCTTGAATCCGAATTGACTGCCTTTTTAGGCTACAATCCTTATGAGCGCGATGGCTGGAATA
CCGGAAATTCTAGAAATGGTGCTTATTACCGCAAGGTTGATACGCAATTCGGACAAATAGAAATCAAAGTTCCTAGAGAC
AGAAACGGTGAGTTTCATCAACACACTATGCCAGATTATAAAAGGCATACTGATGTTTTAGAGCAAACTGTTATCAAGCT
CTATTCCAAGGGCGTCACAACCCGAGAAATCGCTGATTTGATTGAGAAAATGTATGGCGGCTATTATTCTCCAGCTATGG
TTTCCAATATTTCTAAAGAAATGATTCCCAAAGTTGAGGCATATCATCAGCGACATCTGTCAGATAAGTTCTTCTGCGTT
TATCTCGATGCCACCTATATTCCTCTTAAGCGGGTCACTTATGAGCGCGAAGCAGTTTATATCGCCATCGGTATCAAACC
TAATGGTCATAAAGAAGTGATCGACTACTGTATTGCGCCTACTGAAAATATTGAGATTTGGAGCGAAATGCTCAAAGGCT
TCAAGAGTCGCGGCCTTGAACAGGTAGAGCTCTTCTTGTCTGACGGAGTAGTTGGCATGAAAGAGGCTATCTGCCAGTCC
TATCCTAAAGCGCATTTTCAACGCTGCTTGGTACACGTCATGCGTAATATCAGTGCCAAAATGCGGGTTGACGATCGACA
AAAAGCACTGGATGAATTCAAGCAGATTCATACTCAGTCAAACAAAGAAATGGCTGTACAGGTGCTGCATGAATTCTATC
AAAACTGGGAAAAAGCCTACAAAAACGTAGTTAGAGATCTTAGACAGGTTGAGCCTGATCTGTTAACCTTTTACAACTAT
CCGCCAGCTATTAGAGCTTCAATTTACTCAACTAACATGATTGAATCCTTTAACAACAGGCTTAAGCGGAAAACCAAGCC
TAAAACAGAATTTCCAACTGAGCAGTCGCTTGACACCTTTATTGGAGTTCAGGCAATGGATTACAATGACCGTTACTTTA
ACAGGATTCATAAAGGATTTGGGCAAGTTCGAGACACTCTAGAATCCTATTTTGATTAA

Protein sequence :
MNDFTKDMTNALFNQDKINDLFRQKLQQAVNDLLESELTAFLGYNPYERDGWNTGNSRNGAYYRKVDTQFGQIEIKVPRD
RNGEFHQHTMPDYKRHTDVLEQTVIKLYSKGVTTREIADLIEKMYGGYYSPAMVSNISKEMIPKVEAYHQRHLSDKFFCV
YLDATYIPLKRVTYEREAVYIAIGIKPNGHKEVIDYCIAPTENIEIWSEMLKGFKSRGLEQVELFLSDGVVGMKEAICQS
YPKAHFQRCLVHVMRNISAKMRVDDRQKALDEFKQIHTQSNKEMAVQVLHEFYQNWEKAYKNVVRDLRQVEPDLLTFYNY
PPAIRASIYSTNMIESFNNRLKRKTKPKTEFPTEQSLDTFIGVQAMDYNDRYFNRIHKGFGQVRDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAM21184.1 transposase Not tested Not named Protein 4e-102 51
ef0057 AAM75262.1 EF0057 Not tested Not named Protein 4e-102 51
EF0595 NP_814357.1 ISEf1, transposase Not tested Not named Protein 7e-102 51
unnamed AAM21176.1 transposase Not tested Not named Protein 4e-102 51