|
Name : clpE (BMD_1249) Accession : YP_003596460.1 Strain : Bacillus megaterium DSM 319 Genome accession: NC_014103 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1241960 - 1244074 bp Length : 2115 bp Strand : - Note : - DNA sequence : ATGATTTGTCAAAACTGTAATAAACGTGAAGCATCTATTCAATTAAATGTACAAACAAATAACCAAAAATCTCAATATCG TTTATGTCATACATGTTATCAAGCACTAATGAAAGAACATAAAATCCCATCAGGTTTTGGAGGTGGCGGCTTTATGAACA TCGATGATTTATTCAAGCAAATGGCGCACGAACAAGCTGCACCGGAACAGCCGCAGCAAGGAAATGGGGGCGGAGGCTTT TTAGACCAGTTCGGCCGAAACTTAACTCAAATTGCGAAAACGGGATTAATTGACCCTGTTATTGGCCGAGAAGAAGAAGT AGAGCGTGTCATTGAAATTTTAAATAGAAGAAACAAAAACAACCCGGTACTAATCGGAGAACCCGGTGTTGGTAAAACAG CTGTTGTTGAAGGGTTAGCTTTAAAAATCGCGGAAGGAAAAGTTCCTGCCAAGCTGTTAAATAAAGATGTATATCTGTTA GATGTAGCATCTCTCGTAGCTAACACCGGCGTGCGCGGTCAATTTGAAGAGCGCATGAAGCAGTTAATTTCTGAGCTTCA ACAGCGAAAAAACGTGATTTTATTTATCGATGAAATTCACCTTCTTGTAGGAGCTGGTTCGGCGGAAGGTTCAATGGACG CAAGCAATATTTTAAAACCAGCTCTTGCACGAGGCGAACTTCAAGTAGTCGGAGCTACAACTTTAAAAGAGTACCGTTCG ATTGAAAAAGATGCGGCTCTTGAACGACGCTTCCAGCCGGTTATGGTTCACGAACCGTCTGTAGAAGAAGCCGTTGAAAT TCTAAAAGGAATTCAAAGTAAATATGAAGATTATCACGGCGTTAGCTATACAGATGAAGCAGTCCGCGCTTGTGTAAATT TATCACACCGCTACATTCAAGATCGCTTCTTGCCTGATAAAGCAATTGACTTGCTAGATGAAGCAGGTTCAAAATTGAAC TTACAGGCAGGCATTACAAATAAAGACGACGCGGCCGCTCGCTTAAAAGAAATTACAAAAGAAAAAGAGCAGGCGCTAAA GGATGAAAAATATGAAGTAGCAGCAAAACTGCGCGATGAAGAAGCTGCTCTTGAAAAACAACTAAACGAAGAACAGCAAA AAATGAATGTGGATATTGCTGACATTCAAGCAATTATTGAAAAGAAAACGGGTATCCCTGTTGGTAAACTTCAAGAAAAT GAATCAGCAAAAATGAAGCATTTAGCAGAGCACTTAGCTCAAAAAGTAATCGGACAGCAGGAAGCTGTAGAAAAAGTAGC AAAAGCGATTCGACGTTCTCGCGCTGGATTAAAAGCGAAGCATCGCCCAATTGGTTCATTCTTATTTGTCGGCCCAACAG GTGTCGGTAAAACAGAGTTAACCAAAACATTAGCTGAAGAACTGTTCGGCTCAAAAGATGCTATGGTTCGTCTAGATATG AGTGAATATATGGAAAAACATGCGGTGTCTAAATTAATCGGTTCACCTCCTGGCTACGTAGGTCACGAAGAGGCAGGACA ATTAACAGAGAAAGTACGCCGTAATCCTTATTCCATCATCTTACTAGATGAAATTGAAAAAGCTCATCCAGACGTTCAGC ATATGTTTCTGCAAATTCTAGAAGATGGACGTCTAACAGATAGTCAAGGTCGCACAGTAAGCTTTAAAGACACAGTTATC ATTATGACAAGTAACGCTGGTGTAGGTGAAAAGAAAATTACGGTTGGGTTTGACGCAGAAAATGACGCACTTAAACAGGC ATCCGTTTTAGATTCACTTTCATCTTATTTCAAACCAGAGTTTTTAAACCGATTTGATACAATCATTGAATTTAATCATC TTGAAAAAGACAACTTGATTAAAATCGTGGACCTTATGCTTGCTGAATTAAAAGAAACATTACAAGAACAAAATATCACG CTGAGCGTAGCAGCTGAAGTAAAAGAAAAACTGGCTGAACTTGGCTACCACCCTGCATTCGGTGCTAGACCGCTCCGCCG AGCAATTCAAGAACAGCTTGAAGATCGAATTACAGACTTACTTTTAGATGACGCAGACGTATCGACAGTGAACGTAACGT TAAATGAAGCAAGCGAAATCACCGTACAAAACTAA Protein sequence : MICQNCNKREASIQLNVQTNNQKSQYRLCHTCYQALMKEHKIPSGFGGGGFMNIDDLFKQMAHEQAAPEQPQQGNGGGGF LDQFGRNLTQIAKTGLIDPVIGREEEVERVIEILNRRNKNNPVLIGEPGVGKTAVVEGLALKIAEGKVPAKLLNKDVYLL DVASLVANTGVRGQFEERMKQLISELQQRKNVILFIDEIHLLVGAGSAEGSMDASNILKPALARGELQVVGATTLKEYRS IEKDAALERRFQPVMVHEPSVEEAVEILKGIQSKYEDYHGVSYTDEAVRACVNLSHRYIQDRFLPDKAIDLLDEAGSKLN LQAGITNKDDAAARLKEITKEKEQALKDEKYEVAAKLRDEEAALEKQLNEEQQKMNVDIADIQAIIEKKTGIPVGKLQEN ESAKMKHLAEHLAQKVIGQQEAVEKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELTKTLAEELFGSKDAMVRLDM SEYMEKHAVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVI IMTSNAGVGEKKITVGFDAENDALKQASVLDSLSSYFKPEFLNRFDTIIEFNHLEKDNLIKIVDLMLAELKETLQEQNIT LSVAAEVKEKLAELGYHPAFGARPLRRAIQEQLEDRITDLLLDDADVSTVNVTLNEASEITVQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-156 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_003596460.1 | ATP-dependent Clp protease ATP-binding subunit ClpE | VFG0080 | Protein | 0.0 | 63 |
| clpE | YP_003596460.1 | ATP-dependent Clp protease ATP-binding subunit ClpE | VFG0079 | Protein | 1e-158 | 55 |
