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Name : clpC (BMD_0105) Accession : YP_003595396.1 Strain : Bacillus megaterium DSM 319 Genome accession: NC_014103 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 97322 - 99763 bp Length : 2442 bp Strand : + Note : - DNA sequence : ATGATGTTTGGTAGATTTACAGAGCGCGCACAAAAAGTATTAGCTTTAGCACAGGAAGAAGCACTACGCCTAGGTCACAA CAACATTGGAACGGAGCATATTTTATTAGGTATCGTTCGTGAAGGTGAAGGAATTGCAGCAAAAGCTCTTTCTGCTCTAG GCCTAAGCACTGAAAAAATTCAAAAAGAAGTGGAAGCATTAATTGGCAGAGGCCAAGAATTAACGCAGACCATTCATTAT ACACCTCGAGCGAAAAAAGTCATTGAACTTTCAATGGATGAAGCCCGAAAGCTTGGTCATTCTTATGTAGGAACAGAACA TATCTTACTAGGCTTAATTCGTGAAGGTGAAGGCGTTGCAGCACGCGTTTTAAATAATTTAGGTGTGAGCCTAAATAAAG CTCGTCAGCAAGTGCTTCATTTATTAGGTAGCAATGAAGCTGCTTCAAGTCATCAAGGCGGAGGCTCTTCAAACGCTAAT ACACCTACGCTAGACAGCTTAGCACGCGATTTAACAGTTGTAGCGCGCGAAGGAAGCTTAGACCCTGTTATCGGACGTGG GAAAGAAATTCAGCGTGTTATTGAAGTGTTAAGCCGACGTACAAAAAACAATCCTGTATTAATTGGGGAGCCAGGTGTCG GTAAAACGGCAATCGCTGAAGGTTTGGCTCAGCAAATCGTCAACAATGAAGTTCCAGAAATTTTACGTGACAAACGCGTT ATGACTTTGGATATGGGAACGGTCGTTGCTGGTACAAAATACCGCGGAGAATTTGAAGATCGCTTGAAGAAAGTAATGGA TGAAATTCGTCAAGCAGGTAATATCATTCTCTTTATCGATGAGTTACACACATTAATTGGCGCTGGTGGCGCAGAAGGTG CTATCGATGCTTCTAATATTTTAAAACCGTCTCTTGCTCGTGGAGAACTTCAGTGTATCGGTGCTACGACTTTAGATGAA TACAGAAAGTACATTGAAAAAGATGCAGCGTTAGAGCGTCGCTTCCAGCCAATTCAAGTGGATGAACCAACGTTGGAAGA GTCTATTCAAATCTTAAAAGGGCTTCGTGACCGTTATGAAGCGCATCACCGAGTATCTATTTCTGATGAGGCAATCGAGC AAGCGGTGAAACTATCAGATCGCTACATTTCCGATCGTTTTTTACCGGATAAAGCAATCGATTTAATTGATGAAGCTGGT TCAAAAGTGCGTTTGCGTTCATTTACAACGCCGCCAAATTTAAAGGAATTAGAGCAAAAATTAGAATCAGTACGCAATGA AAAAGATGCGTCTGTTCAAAGTCAAGAATTTGAAAAAGCAGCATCTTTACGCGATACAGAGCAACGTCTACGCGAAGAAT TAGAAGACACAAAGAAAATTTGGAAAGAGCAGCAAGGTAAAGAAAACTCAGCTGTAACAGTAGAAGATATTGCGATGGTG GTATCTAGCTGGACGGGTGTACCGGTCTCTAAACTGGCACAGGAAGAGACAGAAAGACTGCTGAACATGGAAGAGATTCT TCACTCTCGTGTGATTGGGCAAGAAGAAGCGGTAAAAGCAGTTGCAAAAGCTGTGCGCCGTGCTAGAGCAGGCTTGAAAG ATCCAAAACGTCCAATTGGTTCATTCATTTTCTTAGGACCAACAGGGGTTGGTAAAACAGAGCTTGCACGTGCATTAGCG GAGTCAATCTTCGGTGATGAAGATGCAATGATTCGTATCGATATGTCTGAGTACATGGAGAAACATTCTACTTCACGCTT AGTAGGTTCACCTCCAGGATATGTTGGATACGAAGAAGGCGGCCAGTTAACGGAAAAAGTAAGAAGAAAACCTTACTCAG TTGTTCTTTTAGACGAAATTGAAAAAGCGCATCCGGATGTATTTAACATTTTATTACAAGTGTTAGAAGATGGACGCTTA ACAGATTCAAAAGGCCGTACAGTTGATTTCCGTAATACGATTTTAATTATGACATCAAACGTAGGTGCTGATACATTAAA ACGAAGCAAGCACTTAGGGTTCACAGTGGAAGCAGAAGGGCAAGAATACAAAGATATGAAAGGAAAAGTAATGGCGGAAA TGAAGCGCGCTTTCCGTCCGGAGTTCCTAAACCGTATCGATGAAATTATCGTCTTCCATTCATTAGAGAAACCTCACTTA GCTGAAATCGTTAAATTAATGGCGGATCAGTTAACAAAACGCTTAAAAGAGCAAGAAATTGATCTTGAATTAACAAAAGA GGCAATTGATAAGATTGCAGAGGAAGGTTTTGATCCAGAATACGGTGCTCGTCCACTTCGTAGAGCGATTCAAAAGCATA TTGAAGACCGTTTATCTGAAGAGCTGCTAAAAGGGGTTGTTCAAAAAGGTCAGAAAGTGACGCTAGATGTAGATAAAGGA GAATTTGTTGTTAAATCCTCCGCTCCAAGCAGCATCAGCTAA Protein sequence : MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQKEVEALIGRGQELTQTIHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLHLLGSNEAASSHQGGGSSNAN TPTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLSDRYISDRFLPDKAIDLIDEAG SKVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFEKAASLRDTEQRLREELEDTKKIWKEQQGKENSAVTVEDIAMV VSSWTGVPVSKLAQEETERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTILIMTSNVGADTLKRSKHLGFTVEAEGQEYKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHL AEIVKLMADQLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQKGQKVTLDVDKG EFVVKSSAPSSIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003595396.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 77 |
| clpC | YP_003595396.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 2e-152 | 52 |
