|
Name : Cseg_4106 (Cseg_4106) Accession : YP_003595135.1 Strain : Caulobacter segnis ATCC 21756 Genome accession: NC_014100 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 4501198 - 4503159 bp Length : 1962 bp Strand : + Note : KEGG: ccs:CCNA_03735 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region DNA sequence : ATGCCCGTTTCGCCCATCAAGATGGCCGACGCGATCCGCGTCCTTTCCATGGACGCCGTGCACAAGGCCAAGTCCGGACA CCAAGGCATGCCGATGGGCATGGCCGACGTGGCGACCGTGCTGTGGAGCAAGTTCCTGAAGTTCGACGCGAGCAAGCCCG ACTGGGCCGACCGCGACCGCTTCGTGCTGTCGGCCGGCCACGGCTCGATGCTGCTCTATTCCCTGCTTCACCTGACCGGC TTCAAGGCCGTGACGATGAAGGAGATCGAGAACTTCCGTCAGTGGGGCTCGCTGACCCCCGGCCACCCGGAAGTCCATCA CACCCCTGGCGTCGAGACCACCACCGGCCCGCTGGGCCAGGGCCTGGCCACCGCCGTCGGCATGGCGATGGCCGAAGCCC ATCTGGCCGCGCGCTTTGGTCATGAGCTCGTCGACCACCGCACCTGGGTGATCGCCGGCGACGGCTGCCTGATGGAAGGC GTCAGCCACGAGGCGATCAGCATCGCCGGCCGCCTGCGCCTGAAGAAGCTGACGGTGCTGTTCGACGACAACAACACCAC CATCGACGGTGAAGCCACGATCTCCGAGACCGGCGACCAGGTCGCCCGGTTCAAGGCGGCCGGCTGGGCCGTGAAGGTCG TCGACGGCCACGACCACGGCAAGATCGCCGCGGCCCTGCGCTGGGCCACCAAGCAGGACCGCCCGACCATGATCGCGTGC AAGACGCTGATCTCGAAGGGCGCGGGTCCCAAGGAAGGCGACCCCCACAGCCACGGCTACACCCTGTTCGACGACCAGAT CAAAGCCGCCCGTGAAGCCATGGGCTGGGACGCCGCGCCGTTCACCATGCCCGACGACATCGCCAAGGCCTGGAAGAGCG TCGGCCGTCGCGGCGGCAAGGTCCGTAAGGCCTGGGAGGCCAAGCTGGCCGCCGCGATCAACGCCAGCGACTTCAAGCGC GCCATGGCGGGCGAGCTGCCGGCCAACGCCTTCGAGGCCCTGGACGCTCATATCGCCAAGGCCCTCGAGACCAAGCCCGT CAACGCCACGCGCGTGCACTCCGGCTCGGCCCTGGATCACTTGGTTCCGACGATCCCCGAGATGATCGGCGGCTCGGCCG ACCTGACCGGCTCGAACAACACCCTGGTCAAGGGCATGGGCGCGTTCGACACGCCCGACTACAAGGGCCGCTACGTCCAC TACGGCGTGCGCGAGTTCGGCATGGCCGCGGCCATGAACGGCATGTCGCTGCACGGTGGCGTGATCCCGTACTCGGGCAC CTTCCTGGCGTTCGCCGACTACAGCCGCGCCGCCATCCGTCTGGGCGCGCTGATGGAAGCGCGCGTCATCCACGTGATGA CCCACGACTCCATCGGCCTGGGCGAGGACGGCCCGACCCACCAGCCGGTCGAGCACGTGGCCTCCCTACGCGCCATTCCG AACCTGCTGGTCTTCCGCCCGGCCGACGCGGTGGAAGCCGCCGAGTGCTGGAAGGTCGCCCTGCAACAGACGCGCACACC GTCGGTGATGACCCTTTCGCGCCAGAAGACCCCGCACGTCCGCGCGCAAGGCGGCGACCTCTCCGCCAAGGGCGCCTATG AGCTGCTGGCGGCCGAGGGCGGCGAGGCGCAGGTGACGATCTTCGCCTCGGGCACCGAGGTCGGCGTCGCCGTCGCCGCG CGCGACATCCTGCAGGCCAAGGGCAAGCCGACCCGCGTCGTCTCAACCCCCTGCTGGGAGCTGTTCGACAAGCAGGACGC CGCCTACCAGGCGGCCGTCATCGGCAAGGCGCCGGTCCGCGTCGCCGTCGAGGCGGGCATTCGGATGGGCTGGGAGCGCT TCATCGGCGAGACCGGCAAGTTCGTCGGCATGAAGAGCTTCGGCGCCTCCGCGCCGTTCGAGGTGCTCTACCAGAAGTTC GGCATCACCGCCGAAGCCGTCGCCGAAGCGGCGCTGGCTTAA Protein sequence : MPVSPIKMADAIRVLSMDAVHKAKSGHQGMPMGMADVATVLWSKFLKFDASKPDWADRDRFVLSAGHGSMLLYSLLHLTG FKAVTMKEIENFRQWGSLTPGHPEVHHTPGVETTTGPLGQGLATAVGMAMAEAHLAARFGHELVDHRTWVIAGDGCLMEG VSHEAISIAGRLRLKKLTVLFDDNNTTIDGEATISETGDQVARFKAAGWAVKVVDGHDHGKIAAALRWATKQDRPTMIAC KTLISKGAGPKEGDPHSHGYTLFDDQIKAAREAMGWDAAPFTMPDDIAKAWKSVGRRGGKVRKAWEAKLAAAINASDFKR AMAGELPANAFEALDAHIAKALETKPVNATRVHSGSALDHLVPTIPEMIGGSADLTGSNNTLVKGMGAFDTPDYKGRYVH YGVREFGMAAAMNGMSLHGGVIPYSGTFLAFADYSRAAIRLGALMEARVIHVMTHDSIGLGEDGPTHQPVEHVASLRAIP NLLVFRPADAVEAAECWKVALQQTRTPSVMTLSRQKTPHVRAQGGDLSAKGAYELLAAEGGEAQVTIFASGTEVGVAVAA RDILQAKGKPTRVVSTPCWELFDKQDAAYQAAVIGKAPVRVAVEAGIRMGWERFIGETGKFVGMKSFGASAPFEVLYQKF GITAEAVAEAALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 6e-135 | 49 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-132 | 47 |
