Gene Information

Name : Cseg_2883 (Cseg_2883)
Accession : YP_003593948.1
Strain : Caulobacter segnis ATCC 21756
Genome accession: NC_014100
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 3142375 - 3142569 bp
Length : 195 bp
Strand : -
Note : KEGG: ccs:CCNA_02315 transcriptional regulator, Cro/CI family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence :
ATGAAGAACCGCCTGAAAGTTCTCCGCGCCGAGCGGGACTGGAGCCAGGCCGATTTGGCCGACCGGCTCGAGGTTTCCCG
CCAGACCATCAACGCCCTCGAGACGGGCAAGTACGACCCCAGCTTGCCGCTGGCGTTCAGGATCGCCCGTCTCTTCGGCC
AGCCCATCGAAGCCATCTTCCAGGACGAGGCCTGA

Protein sequence :
MKNRLKVLRAERDWSQADLADRLEVSRQTINALETGKYDPSLPLAFRIARLFGQPIEAIFQDEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-08 55
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 7e-09 55
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cseg_2883 YP_003593948.1 XRE family transcriptional regulator VFG2175 Protein 3e-09 55
Cseg_2883 YP_003593948.1 XRE family transcriptional regulator VFG2168 Protein 3e-09 55