Gene Information

Name : ZPR_0879 (ZPR_0879)
Accession : YP_003583425.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 952237 - 953832 bp
Length : 1596 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGAAGACCAAAAAAAAGCACTCGAAAAACAATTATGGGCTATAGCCAATTTGTTACGTGGTAAAATGGATGCCGA
CGATTACCGTAATTATATCTTAGGATTCATCTTTTTTAAATACTTATCTGAAAAACTTCATATTTATGCCGATCGTATCT
TAGAACCTGACGGACTTAAATATACCGAGATCGACGAAAATTCAGAAGAGGGGAAAGTGTATATCGAAGCCATTAAAAAA
GCCTGTATCAAGAATATTGGCTATTTTCTAAAACCTTCAGAATTGTTTACCAGTATTGCCAATAAAGGGGCAAATCTTAC
CGGTATAGCAACCAACGAAAATCAAGAAGCTACCCAGTTTTTTATCTTAGAAGATCTAGAGCATATTCTAAATAATATCG
AGCAGAGTACCATGGGTACCGATAGCGAAGACGATTTTGTGCGTCTGTTTGAAGATCTTGATCTTACCTCTTCTAAATTA
GGGCGAACCGTAAAAGCAAAAAACGAACTCATCGCTAAAATCTTAGCGCATTTAAATCAAATCGATTTTCAGTTAGAAAA
TGCAGAAAGTGATGTGTTGGGAGATGCGTACGAATATTTAATCGGTCAATTTGCCGAGAATGCGGGTAAAAAAGCAGGCG
AATTCTATACGCCTCAACAAGTATCAACCATTTTAGCTAAGATCGTTACCTCACGTAAAAAACGTATCAAATCGGTGTAT
GATCCTACTTGTGGTTCGGGTTCGTTGTTATTACGGGTAGCCAAAGAAGTAGAAGATGTAGGTTATTTTTATGGACAGGA
ACTTAATAGAACGACCTATAACTTAGCCCGAATGAATATGATCTTGCACGATGTGCATTTCTCTAAATTCGATATTAAAC
AGGAAGATACTTTAGAAGAACCGCAGCATTTAGACGTACAGGCTGAAGCTATTGTTGCCAATCCTCCATTTTCAGCAAAG
TGGAGTGCCAAGGGCGTATTCTCTAGTGACGATCGTTTTAGCCAATACGGGAAGTTAGCCCCAAAAAGTAAAGCCGATTT
TGCCTTTGTACAGCATATGATTCATCATTTGGACGAAAGCGGTATTATGGCCACCGTCTTACCGCACGGGGTGTTGTTTA
GAGGAGCAGCCGAAGGGCATATACGTAAATATCTTATTGAAGACCGTAATTATATCGATGCGGTGATTGGCTTACCGGCA
AATATCTTTTTTGGTACGGGCATCCCTACCTGTATTTTGGTGATTAAAAAATGTAGAGAGATCGATGATGATGTTTTGTT
TATTGATGCCAGTAAAGGCTTTGAAAAGCAAGGGAAAGACAATGTGTTGTTACCGGAACATATTGAAAAAATTGTGGATA
CCTATACCGAACGAAAGGAACTTGATAAATTTAGTTACTGCGCTTCTTTAGCAGAAATAAAAGAAAACGATTATAACTTA
AATATCCCACGTTATGTAGATACGTTTGAAGAAGAAGAACCGGTAGATATCGAAGCCGTTGCAAAAGAACTAAAAGCTTT
GGAAACCGAAATACAACAAACCGATAGCACGATTGCTGAATTCTGTAAAGAGTTAAAGATTAAAACGCCTTTTTAA

Protein sequence :
MSEDQKKALEKQLWAIANLLRGKMDADDYRNYILGFIFFKYLSEKLHIYADRILEPDGLKYTEIDENSEEGKVYIEAIKK
ACIKNIGYFLKPSELFTSIANKGANLTGIATNENQEATQFFILEDLEHILNNIEQSTMGTDSEDDFVRLFEDLDLTSSKL
GRTVKAKNELIAKILAHLNQIDFQLENAESDVLGDAYEYLIGQFAENAGKKAGEFYTPQQVSTILAKIVTSRKKRIKSVY
DPTCGSGSLLLRVAKEVEDVGYFYGQELNRTTYNLARMNMILHDVHFSKFDIKQEDTLEEPQHLDVQAEAIVANPPFSAK
WSAKGVFSSDDRFSQYGKLAPKSKADFAFVQHMIHHLDESGIMATVLPHGVLFRGAAEGHIRKYLIEDRNYIDAVIGLPA
NIFFGTGIPTCILVIKKCREIDDDVLFIDASKGFEKQGKDNVLLPEHIEKIVDTYTERKELDKFSYCASLAEIKENDYNL
NIPRYVDTFEEEEPVDIEAVAKELKALETEIQQTDSTIAEFCKELKIKTPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 4e-147 58
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 2e-146 56
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 9e-146 56
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 2e-147 56
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 2e-146 56
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 2e-147 56
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 1e-147 56
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-146 56
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 1e-147 56
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 3e-147 56
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 1e-147 56
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 2e-147 56
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 1e-146 56
ORF6 BAC22943.1 - Not tested etd PI Protein 8e-147 56
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 2e-147 56
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-146 56
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 2e-147 56
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 5e-147 56
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 2e-147 56
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 4e-147 56
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 4e-147 56
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 4e-147 56