Gene Information

Name : ZPR_4127 (ZPR_4127)
Accession : YP_003586627.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : type I restriction enzyme HsdR
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 4409816 - 4412911 bp
Length : 3096 bp
Strand : +
Note : -

DNA sequence :
ATGAACAACCAAACCAACGAACAAGCTTTAGAAGCTGCTATTCAAAAATGCTTAACCGGGGTTTCACTAGAAACACTCAA
AGAAGAAGGCACTTCAGTTGCAGAAGCTAATGCAGTATATAGAACAAGAAACGGGTATTATAATGGAGACCGTTCGCATT
TTGATTCAAAATATGCACTAGATACCGAGCGGTTTTGGGATTTTCTAGAAAGCACACAGGAAGAAGAACTCAATAAACTC
AAACGTAGTAACGATTGGAAACTTAAAATCTTGCAACGTTTGGATCGCATTGTCAAAAAACAAGGGGTTCTGCACGTACT
CAAAAAGGGTTTGGGAGTTGATGATGCACATTTTACCTTATTGTTTCCATTACCTTTAGGAAGTAGCAGTGCAAGAGTTG
CTAAAGATTTCGACAGTAACCAATTTAGCGTAACCCGCCAAGTGCCGTATTCAGAAAGTAATCCGCGGGAAGAAATTGAT
ATGGTAATTTTTGTCAATGGTTTACCGCTAATTACCCTTGAACTCAAAAATCAATGGACAGGTCAAAATGCACGCTTACA
CGGTCAAAACCAATACCGTAAGCAGCGTGATCCCAAAGAACCTTTACTCAATTTTGGACGCTGTCTTGTACATATGACCG
CCGATACCGATGAAGTATTTATGACGACCAAGCTCAACAGCACAGATACATTTTTCTTACCTTTTAATCAGGGTTATGAA
AATGGTAAAGGCAACCCGCCTAATCCTTTTGGTCATAAAACAGCCTATTTATGGGAAGAGGTATTTAAGCCAAAAAGCAT
AGCCAATATTATTCAGCACTTTGTGCGCTTAGATGGGAAGTCTAAAGACCCTATAAATAAACGTACTTTATTTTTTCCTA
GATACCATCAAATGCGTGTGGTACGAAAAATTATGGCACACGTGAGCGAAAATGGAACGGGCTTCCGTTACCTTATTCAA
CATTCTGCTGGTTCGGGAAAATCAAATTCTATTACCTGGGCAGCTTACCAGTTGATAGAAGCCTATCCAGAAAACGAACA
GGCGGCCGGTAAAAAAGCAATCGACAAACCTATTTTTGATTCTGTTATTGTCGTAACCGATAGACGTTTATTGGATCGAC
AGATTCGTGAAAACATTCGCAGTTTTTCGGAAGTCAAAAATATTGTAGCCCCTGCTTATTCCAGTCGGGGCCTGAAAGAT
AGCTTGGAGCAAGGTAAAAAGATCATTATTACTACGATTCAAAAATTCCCTTTTATCGTGGAAGGCATTTCTGATTTAAG
TGATAAACGTTTTGCCGTGATTATTGATGAAGCACACAGTTCTCAATCGGGCACCACGGCAGATAACCTAAACCGGGCTA
TTGGGCAAGAATCAACCGAAGCAGAAGCCGAAGATGTTCAAGATAAAATAGCGCAAGTGATGCAATCCCGAAAGATGCAA
ACCAATGCTTCTTATTTAGCCTTTACAGCAACACCCAAAAACAGTACATTAGAAAAGTTTGGAATGCCACAAGAAGATGG
CAGTTTTGAGCCTTTCGATTTGTATGCAATGAAACAAGCCATAGAAGAAGGTTTTATTTTAGACGTACTGAACAATTATA
CCACATTTAAAAGCTATTACCGTTTGACGAAGTCGGCAGAAGAAAATCCGATATTCGATACCAAAAAAGCCCAAAAGAAA
TTAAAAGCCTTTGTGGAAAAAGACCAGCAAACCATAGACACCAAAGCTGAAGTGATGCTGGATCATTTCACTAAGCATTT
TGTGCAAAAGAAAAAATTAAAAGGAAAAGCCAAAGCGATGTTCGTGACTCAAAGTATTGAGTCTGCTGTTCGATATTTCA
AAGCTATTCAACGTTTGTTGGAAGAGCGGGGAAACCCGTTTGGAGCCATCTGCGCTTTTTCAGGAGAAAAAGAAGTAGAC
GGCATTTCCTTAACCGAAGAATCCGTCAACAATCTACCTGCACATTTAGATACTGCCAAGTCATCTGATCCTGATTATAT
TCAGGACAAGATTGCGCGTTATTTTGATATGGACCATTACCGTATTTTGGTAGTCGCCAATAAATACCTCACAGGATTTG
ACCAACCAAAACTCTGCGCAATGTATGTAGATAAAAAACTGCAAGGCGTACTGGCTGTTCAAGCCTTATCTCGGTTAAAC
CGTTCTGCTCCAAAACTGGGAAAAAAGACAGAAGATATTTTTGTGTTGGACTTTTTCAATGACAAAGAGGATATAAAAAA
AGCTTTTGACCCTTATTATACGGTAGCAACGTTAAGTAGTGCAACAGATGTAAATGTATTGCACGATGCTAAAATGATTC
TGGATGAAGAAGGTGTTTACGAATGGTCTGAAGTGGAACTGTTCAACGACTTATTCTTTTCAAATGCAGATACGGAAACC
TTGGGAGCCGCTTTGAGCAAACCTCAAGCCCGTTTTGATGTGGAATTGCAGTTAGAGCAAAAGCAAAAGGCGGATTATAA
AATCAAAGCGCGGCAGTTTGTTAAAATTTATGGACAAGTGGCAGCACTATTGGATTTCAATAATCCGGAATGGGAAATGC
TCTATTGGTTCCTAAAGTTCCTTATCCCTAAAATGATTGTCAAAGACCCCGATGAAGACGACTTGGACAAATTATTGGAT
GCCGTTGACTTAGCAACGTATGGGTTGGAACAGCGTGATAAAATAGGGGTGAAAATAGGTTTGGATGAAAGTGATTCAGA
ACTCGATCCGCAGAACTCAAGTATTCGCGGTGCTCACGGAGAAAATGAAGAAGATGAACTAGAAGCAATTATCAAAACTT
TTAACGAACGTTATTTTCACGGTTGGGATGCTACCCCCGAGGAGCAAAGAGTTAAAATGCTAAGCTTGCAGAAATTTGTA
GAAGCTCATCCAGACTTCGAAGAAAAGGTTAAACAAAACCCAGACGAGCAAAATAGCGATATTGCTTTACGTCGCATTAT
TCAGGAAGTGTTATCCAGACAAAGAAAAAATGAACTGGAACTCTATAAATTGCACACCCAAGATAGCGCCTTTCAACAAG
CGTTTTTCGATACGCTGAAACGGATGGTTCAATTGGATGTACCGACAAATAAATGA

Protein sequence :
MNNQTNEQALEAAIQKCLTGVSLETLKEEGTSVAEANAVYRTRNGYYNGDRSHFDSKYALDTERFWDFLESTQEEELNKL
KRSNDWKLKILQRLDRIVKKQGVLHVLKKGLGVDDAHFTLLFPLPLGSSSARVAKDFDSNQFSVTRQVPYSESNPREEID
MVIFVNGLPLITLELKNQWTGQNARLHGQNQYRKQRDPKEPLLNFGRCLVHMTADTDEVFMTTKLNSTDTFFLPFNQGYE
NGKGNPPNPFGHKTAYLWEEVFKPKSIANIIQHFVRLDGKSKDPINKRTLFFPRYHQMRVVRKIMAHVSENGTGFRYLIQ
HSAGSGKSNSITWAAYQLIEAYPENEQAAGKKAIDKPIFDSVIVVTDRRLLDRQIRENIRSFSEVKNIVAPAYSSRGLKD
SLEQGKKIIITTIQKFPFIVEGISDLSDKRFAVIIDEAHSSQSGTTADNLNRAIGQESTEAEAEDVQDKIAQVMQSRKMQ
TNASYLAFTATPKNSTLEKFGMPQEDGSFEPFDLYAMKQAIEEGFILDVLNNYTTFKSYYRLTKSAEENPIFDTKKAQKK
LKAFVEKDQQTIDTKAEVMLDHFTKHFVQKKKLKGKAKAMFVTQSIESAVRYFKAIQRLLEERGNPFGAICAFSGEKEVD
GISLTEESVNNLPAHLDTAKSSDPDYIQDKIARYFDMDHYRILVVANKYLTGFDQPKLCAMYVDKKLQGVLAVQALSRLN
RSAPKLGKKTEDIFVLDFFNDKEDIKKAFDPYYTVATLSSATDVNVLHDAKMILDEEGVYEWSEVELFNDLFFSNADTET
LGAALSKPQARFDVELQLEQKQKADYKIKARQFVKIYGQVAALLDFNNPEWEMLYWFLKFLIPKMIVKDPDEDDLDKLLD
AVDLATYGLEQRDKIGVKIGLDESDSELDPQNSSIRGAHGENEEDELEAIIKTFNERYFHGWDATPEEQRVKMLSLQKFV
EAHPDFEEKVKQNPDEQNSDIALRRIIQEVLSRQRKNELELYKLHTQDSAFQQAFFDTLKRMVQLDVPTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 62
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 62
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_4127 YP_003586627.1 type I restriction enzyme HsdR VFG1098 Protein 0.0 62