|
Name : ZPR_4127 (ZPR_4127) Accession : YP_003586627.1 Strain : Zunongwangia profunda SMA-87 Genome accession: NC_014041 Putative virulence/resistance : Virulence Product : type I restriction enzyme HsdR Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 4409816 - 4412911 bp Length : 3096 bp Strand : + Note : - DNA sequence : ATGAACAACCAAACCAACGAACAAGCTTTAGAAGCTGCTATTCAAAAATGCTTAACCGGGGTTTCACTAGAAACACTCAA AGAAGAAGGCACTTCAGTTGCAGAAGCTAATGCAGTATATAGAACAAGAAACGGGTATTATAATGGAGACCGTTCGCATT TTGATTCAAAATATGCACTAGATACCGAGCGGTTTTGGGATTTTCTAGAAAGCACACAGGAAGAAGAACTCAATAAACTC AAACGTAGTAACGATTGGAAACTTAAAATCTTGCAACGTTTGGATCGCATTGTCAAAAAACAAGGGGTTCTGCACGTACT CAAAAAGGGTTTGGGAGTTGATGATGCACATTTTACCTTATTGTTTCCATTACCTTTAGGAAGTAGCAGTGCAAGAGTTG CTAAAGATTTCGACAGTAACCAATTTAGCGTAACCCGCCAAGTGCCGTATTCAGAAAGTAATCCGCGGGAAGAAATTGAT ATGGTAATTTTTGTCAATGGTTTACCGCTAATTACCCTTGAACTCAAAAATCAATGGACAGGTCAAAATGCACGCTTACA CGGTCAAAACCAATACCGTAAGCAGCGTGATCCCAAAGAACCTTTACTCAATTTTGGACGCTGTCTTGTACATATGACCG CCGATACCGATGAAGTATTTATGACGACCAAGCTCAACAGCACAGATACATTTTTCTTACCTTTTAATCAGGGTTATGAA AATGGTAAAGGCAACCCGCCTAATCCTTTTGGTCATAAAACAGCCTATTTATGGGAAGAGGTATTTAAGCCAAAAAGCAT AGCCAATATTATTCAGCACTTTGTGCGCTTAGATGGGAAGTCTAAAGACCCTATAAATAAACGTACTTTATTTTTTCCTA GATACCATCAAATGCGTGTGGTACGAAAAATTATGGCACACGTGAGCGAAAATGGAACGGGCTTCCGTTACCTTATTCAA CATTCTGCTGGTTCGGGAAAATCAAATTCTATTACCTGGGCAGCTTACCAGTTGATAGAAGCCTATCCAGAAAACGAACA GGCGGCCGGTAAAAAAGCAATCGACAAACCTATTTTTGATTCTGTTATTGTCGTAACCGATAGACGTTTATTGGATCGAC AGATTCGTGAAAACATTCGCAGTTTTTCGGAAGTCAAAAATATTGTAGCCCCTGCTTATTCCAGTCGGGGCCTGAAAGAT AGCTTGGAGCAAGGTAAAAAGATCATTATTACTACGATTCAAAAATTCCCTTTTATCGTGGAAGGCATTTCTGATTTAAG TGATAAACGTTTTGCCGTGATTATTGATGAAGCACACAGTTCTCAATCGGGCACCACGGCAGATAACCTAAACCGGGCTA TTGGGCAAGAATCAACCGAAGCAGAAGCCGAAGATGTTCAAGATAAAATAGCGCAAGTGATGCAATCCCGAAAGATGCAA ACCAATGCTTCTTATTTAGCCTTTACAGCAACACCCAAAAACAGTACATTAGAAAAGTTTGGAATGCCACAAGAAGATGG CAGTTTTGAGCCTTTCGATTTGTATGCAATGAAACAAGCCATAGAAGAAGGTTTTATTTTAGACGTACTGAACAATTATA CCACATTTAAAAGCTATTACCGTTTGACGAAGTCGGCAGAAGAAAATCCGATATTCGATACCAAAAAAGCCCAAAAGAAA TTAAAAGCCTTTGTGGAAAAAGACCAGCAAACCATAGACACCAAAGCTGAAGTGATGCTGGATCATTTCACTAAGCATTT TGTGCAAAAGAAAAAATTAAAAGGAAAAGCCAAAGCGATGTTCGTGACTCAAAGTATTGAGTCTGCTGTTCGATATTTCA AAGCTATTCAACGTTTGTTGGAAGAGCGGGGAAACCCGTTTGGAGCCATCTGCGCTTTTTCAGGAGAAAAAGAAGTAGAC GGCATTTCCTTAACCGAAGAATCCGTCAACAATCTACCTGCACATTTAGATACTGCCAAGTCATCTGATCCTGATTATAT TCAGGACAAGATTGCGCGTTATTTTGATATGGACCATTACCGTATTTTGGTAGTCGCCAATAAATACCTCACAGGATTTG ACCAACCAAAACTCTGCGCAATGTATGTAGATAAAAAACTGCAAGGCGTACTGGCTGTTCAAGCCTTATCTCGGTTAAAC CGTTCTGCTCCAAAACTGGGAAAAAAGACAGAAGATATTTTTGTGTTGGACTTTTTCAATGACAAAGAGGATATAAAAAA AGCTTTTGACCCTTATTATACGGTAGCAACGTTAAGTAGTGCAACAGATGTAAATGTATTGCACGATGCTAAAATGATTC TGGATGAAGAAGGTGTTTACGAATGGTCTGAAGTGGAACTGTTCAACGACTTATTCTTTTCAAATGCAGATACGGAAACC TTGGGAGCCGCTTTGAGCAAACCTCAAGCCCGTTTTGATGTGGAATTGCAGTTAGAGCAAAAGCAAAAGGCGGATTATAA AATCAAAGCGCGGCAGTTTGTTAAAATTTATGGACAAGTGGCAGCACTATTGGATTTCAATAATCCGGAATGGGAAATGC TCTATTGGTTCCTAAAGTTCCTTATCCCTAAAATGATTGTCAAAGACCCCGATGAAGACGACTTGGACAAATTATTGGAT GCCGTTGACTTAGCAACGTATGGGTTGGAACAGCGTGATAAAATAGGGGTGAAAATAGGTTTGGATGAAAGTGATTCAGA ACTCGATCCGCAGAACTCAAGTATTCGCGGTGCTCACGGAGAAAATGAAGAAGATGAACTAGAAGCAATTATCAAAACTT TTAACGAACGTTATTTTCACGGTTGGGATGCTACCCCCGAGGAGCAAAGAGTTAAAATGCTAAGCTTGCAGAAATTTGTA GAAGCTCATCCAGACTTCGAAGAAAAGGTTAAACAAAACCCAGACGAGCAAAATAGCGATATTGCTTTACGTCGCATTAT TCAGGAAGTGTTATCCAGACAAAGAAAAAATGAACTGGAACTCTATAAATTGCACACCCAAGATAGCGCCTTTCAACAAG CGTTTTTCGATACGCTGAAACGGATGGTTCAATTGGATGTACCGACAAATAAATGA Protein sequence : MNNQTNEQALEAAIQKCLTGVSLETLKEEGTSVAEANAVYRTRNGYYNGDRSHFDSKYALDTERFWDFLESTQEEELNKL KRSNDWKLKILQRLDRIVKKQGVLHVLKKGLGVDDAHFTLLFPLPLGSSSARVAKDFDSNQFSVTRQVPYSESNPREEID MVIFVNGLPLITLELKNQWTGQNARLHGQNQYRKQRDPKEPLLNFGRCLVHMTADTDEVFMTTKLNSTDTFFLPFNQGYE NGKGNPPNPFGHKTAYLWEEVFKPKSIANIIQHFVRLDGKSKDPINKRTLFFPRYHQMRVVRKIMAHVSENGTGFRYLIQ HSAGSGKSNSITWAAYQLIEAYPENEQAAGKKAIDKPIFDSVIVVTDRRLLDRQIRENIRSFSEVKNIVAPAYSSRGLKD SLEQGKKIIITTIQKFPFIVEGISDLSDKRFAVIIDEAHSSQSGTTADNLNRAIGQESTEAEAEDVQDKIAQVMQSRKMQ TNASYLAFTATPKNSTLEKFGMPQEDGSFEPFDLYAMKQAIEEGFILDVLNNYTTFKSYYRLTKSAEENPIFDTKKAQKK LKAFVEKDQQTIDTKAEVMLDHFTKHFVQKKKLKGKAKAMFVTQSIESAVRYFKAIQRLLEERGNPFGAICAFSGEKEVD GISLTEESVNNLPAHLDTAKSSDPDYIQDKIARYFDMDHYRILVVANKYLTGFDQPKLCAMYVDKKLQGVLAVQALSRLN RSAPKLGKKTEDIFVLDFFNDKEDIKKAFDPYYTVATLSSATDVNVLHDAKMILDEEGVYEWSEVELFNDLFFSNADTET LGAALSKPQARFDVELQLEQKQKADYKIKARQFVKIYGQVAALLDFNNPEWEMLYWFLKFLIPKMIVKDPDEDDLDKLLD AVDLATYGLEQRDKIGVKIGLDESDSELDPQNSSIRGAHGENEEDELEAIIKTFNERYFHGWDATPEEQRVKMLSLQKFV EAHPDFEEKVKQNPDEQNSDIALRRIIQEVLSRQRKNELELYKLHTQDSAFQQAFFDTLKRMVQLDVPTNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 62 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 62 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ZPR_4127 | YP_003586627.1 | type I restriction enzyme HsdR | VFG1098 | Protein | 0.0 | 62 |
