Gene Information

Name : ZPR_4122 (ZPR_4122)
Accession : YP_003586622.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : DNA methylase HsdM
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 4404585 - 4406939 bp
Length : 2355 bp
Strand : +
Note : -

DNA sequence :
ATGACTCAAAATTCGCATTCTAAACTTATAGCTTTTATCTGGTCTATTGCAGACGATTGTTTACGCGATGTGTATGTACG
CGGAAAATATCGTGATGTTATCCTACCAATGGTTGTTTTGCGCCGATTGGATGCTTTACTCGAACCATCGAAAAAAGAAG
TAATGGACGAAGTCCAGTTTCAAACGGTAGAAGCAGGCTTTACAGAGCTAGAATCTGAAGGACTGAAAACGGCAGCTGGT
TATGAGTTTTATAATACTAGCAAATGGACGCTTCAATTACTAAAAGATACTGCTTCCAATAATCAGAGCATTCTCTTGGC
TAATTTTGAAGATTATATTCTAGGATTTAGCGATAATGTTAAGGAAATTATTTCAAAATTTAATTTGGTTCGCCAAATTA
AACATATGGCCACCAAGGATGTATTACTCGATGTGCTGGAAAAATTCACCTCACCACGAATTAACTTAACTCCATTTGAG
AAAGAAGATCCCGATGGTTATAAACTTCCCGCATTATCCAATTTGGGGATGGGATATGTGTTTGAGGAACTCATACGAAA
ATTCAACGAAGAAAATAACGAAGAAGCCGGAGAACACTTTACACCTCGTGAGGTAATTGAATTAATGACGCATTTGGTAT
TCGAACCCGTTAAGCACCAACTCCCTCCAGTAATGACTATTTACGACCCCGCCTGTGGCAGTGGCGGAATGCTCACGGAA
AGTCAGAATTTCATCAAAGATGAAGCCGGTGCCATTCAAGCCAAAGGAGATGTCTATTTATTTGGAAAGGAAATCAATGA
CGAGACCTATGCTATTTGTAAAAGTGATATGATGATTAAGGGAAATGACCCTCAAAATATCAGATTAGGATCTACGCTTT
CTACCGATGAATTTTCCAGAAAGAATTTCGACTTTATGCTCTCAAATCCGCCTTATGGAAAAAGCTGGGCCAGTGAGCAG
AAATACATCAAAGACGGAAAGGATATTATCGACCCACGTTTTACCATTCAACTTTCCAATTATTGGCAAGAAACAGACAC
CGAAAAAGCTATCCCCAGAAGCAGCGATGGGCAATTATTGTTTTTGATGGAAATGGTGTCCAAAATGAAAAATCTAAAAC
AAAGTCCATTAGGAAGCCGAATTGCCAGTGTTCACAACGGCAGTAGTCTTTTTACCGGTGATGCAGGCAGTGGGGAAAGC
AACATTAGACGTTATTTAATTGAAAATGATTTACTGGAAGCCATTGTGCAACTACCCAATAACCTATTTTACAATACGGG
TATTACCACTTATATATGGTTGCTTAGCAATAATAAAACCAAAGAACGGCAAGGTAAAGTACAACTCATCGATGCGCAAC
CGCTTTACCAAAAACTGAGAAAAAACCTGGGTCAAAAAAATTGTGAATTTACCCCGGAACATATTACAGAAATCACGCAG
ACTTTTCTCAATTCAGAAGCAAGAGAAAGAGAGGAAGACGACCAATTGGCAAGCAAAATTTTCAACAATACAGATTTTGG
GTATTATAAAGTGACTATTGAACGTCCCAAGCGCTTGCGATCTCAATTTACTTTAGAGGCTATTGAAAGTTTACGCTACT
ACAGCCAATTGCAAGAGCCAATGGAGTATGCATATAAAACCTTTGGTAAAAAGGTTTATACAGAATTGCCCAGTATTAAA
ACAGAAATCTTGAACTGGTGTGAGGCTAATGATATCAGTTTAAGCTCTAAAAAGAAAGCTCAGCTTACCGCAAAGAAAAC
TTGGGAAGATGCTAAATTCTTGGTAGATACCGCCACCAAATTATATGAGGCTATTGGAGACGCGGTGTTTATGGACTTTA
ACCATTTTTCAAAACAGGTCAATAAAGCACTCAAAAAATTGGAAATCAAACTAAGTAACGCTCAGAAAAAAGCCATTTTG
GATGCGGTGAGTGTTTACGATCCTGAAGCCGAAAAAGTTATCAAAACCACCAAAATCTTAAAAGGTGAAAAACTGGAAAA
CCTTTGCGCCCATTTGGATTGCACCCCAGACCAACTCTCGCATTTCGGGTATTTCCCAAGCGGAAACAAAGGCACCTACA
CCATTTACGAGAGTGAAAGTGATTTACGGGATTATGAAAATGTTCCCTTAGATGAAACCGTTTATGATTACTTTTTACGG
GAAGTTTCAACTCACGTGGAGGAAGCTTGGATAGATTTGGATAAAACCAAAATTGGATATGAAATTAGTTTCAACAAGTA
TTTCTATCAGCATAAAGCCTTACGCCCGCTTGATGAAATTGATAAAGACATACGCGAACTGGAAACCAAAAGTGAAGGCT
TGATTATGGATATTTTAAACAGCGTGAACCTATGA

Protein sequence :
MTQNSHSKLIAFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDALLEPSKKEVMDEVQFQTVEAGFTELESEGLKTAAG
YEFYNTSKWTLQLLKDTASNNQSILLANFEDYILGFSDNVKEIISKFNLVRQIKHMATKDVLLDVLEKFTSPRINLTPFE
KEDPDGYKLPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFEPVKHQLPPVMTIYDPACGSGGMLTE
SQNFIKDEAGAIQAKGDVYLFGKEINDETYAICKSDMMIKGNDPQNIRLGSTLSTDEFSRKNFDFMLSNPPYGKSWASEQ
KYIKDGKDIIDPRFTIQLSNYWQETDTEKAIPRSSDGQLLFLMEMVSKMKNLKQSPLGSRIASVHNGSSLFTGDAGSGES
NIRRYLIENDLLEAIVQLPNNLFYNTGITTYIWLLSNNKTKERQGKVQLIDAQPLYQKLRKNLGQKNCEFTPEHITEITQ
TFLNSEAREREEDDQLASKIFNNTDFGYYKVTIERPKRLRSQFTLEAIESLRYYSQLQEPMEYAYKTFGKKVYTELPSIK
TEILNWCEANDISLSSKKKAQLTAKKTWEDAKFLVDTATKLYEAIGDAVFMDFNHFSKQVNKALKKLEIKLSNAQKKAIL
DAVSVYDPEAEKVIKTTKILKGEKLENLCAHLDCTPDQLSHFGYFPSGNKGTYTIYESESDLRDYENVPLDETVYDYFLR
EVSTHVEEAWIDLDKTKIGYEISFNKYFYQHKALRPLDEIDKDIRELETKSEGLIMDILNSVNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 66
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 66
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_4122 YP_003586622.1 DNA methylase HsdM VFG1102 Protein 0.0 66