Gene Information

Name : ZPR_3982 (ZPR_3982)
Accession : YP_003586482.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : RNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 4279727 - 4280965 bp
Length : 1239 bp
Strand : -
Note : -

DNA sequence :
ATGATTGATTATTATGAAACAAAACAACATCCAATAACCAAGAAAATGGTATTGGATGCGTACAAGAAAGTAAAGTCCAA
AAAGGGCAGTGCCGGAGTCGATGGACAGAGTTTACAGAATTTTAGGGAGAACCTCTCTGGAAATTTGTATAAAATCTGGA
ACCGTATGACCTCAGGCAGTTATTTTCCGCCTGTTGTAAAGGAAGTTCGTATAACCAAGAAAACAGGAGGCTTTCGCAGT
CTCGGAATTCCTACGGTATCGGATCGCATTGCGCAACAGGTGATTAAAAGTTACTTAGAACCCAAGGTGGAAAGCAGTTT
TCATCAGAATAGTTATGGATACAGACCCAGGAAAAGTGCGCATCAGGCACTGGAGAAAACAGTGTCCAGATGTGGTTATT
ACAGTTGGGTGGTAGACCTTGATATTCGTGGATTCTTTGATAACATTGACCATACCCTACTGATGAAGGCAGTAGAAAGG
TATACAAAAGAGAAATGGGTGTTGATGTATATTGGAAGGTGGTTGAAAACAGGAGTATCCAGAGAAGGTGAAATCACCGA
TAGAATAAAAGGTACTCCTCAAGGCGGCGTCATTAGTCCGCTACTTGCCAATATATTTCTTCACTTTGCATTCGATAAAT
GGATGCAAATCCATCACTCCAATATGCCTTTCGAACGATATTGCGACGATGCCATCATACATTGCACATCAGAGAAACAA
GCATATTTCATTAGAGAGGCTGTTTCTAAACGGATGAAAGCTTGTAAGTTGGAACTCAATAGTGAGAAAACTCACATTGT
GTATTGCAAGAATCACGTGCACAGCGAAAGTCACAAGAATACAAGTTTTGATTTTCTCGGTTACACGTTCCGCCCCCTCA
GACGACCAACCAAAAATGGTTGGAAACTGACTTACTTTCCAGTAATGAGCCACGCCTCAAAGAAAGAAGCAAGGCGAAGA
CTTAAGAAGGTTGTCAATAGAAAGTTTCGGGGATCCATCCAAGAACTGGCACAGATAATCAACCCTATGATAAGGGGCTG
GTATCAATATTTTTGCAAGTATTCGAAATGGACAACCCGTGGACTATGGTATTGGTTAAACAGGAAAATAGTTAGATGGA
TTAGGAGGTACAGAAAGCGCAGTAGAGTGCAAGCTCGAAAATGGCTAAAAAATGTGTACAAGACTAACCCACAATTGTTT
GAGCATTGGAAACCTGTCTTAGATATAAAACCTTACTAA

Protein sequence :
MIDYYETKQHPITKKMVLDAYKKVKSKKGSAGVDGQSLQNFRENLSGNLYKIWNRMTSGSYFPPVVKEVRITKKTGGFRS
LGIPTVSDRIAQQVIKSYLEPKVESSFHQNSYGYRPRKSAHQALEKTVSRCGYYSWVVDLDIRGFFDNIDHTLLMKAVER
YTKEKWVLMYIGRWLKTGVSREGEITDRIKGTPQGGVISPLLANIFLHFAFDKWMQIHHSNMPFERYCDDAIIHCTSEKQ
AYFIREAVSKRMKACKLELNSEKTHIVYCKNHVHSESHKNTSFDFLGYTFRPLRRPTKNGWKLTYFPVMSHASKKEARRR
LKKVVNRKFRGSIQELAQIINPMIRGWYQYFCKYSKWTTRGLWYWLNRKIVRWIRRYRKRSRVQARKWLKNVYKTNPQLF
EHWKPVLDIKPY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 2e-79 44
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 2e-66 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_3982 YP_003586482.1 RNA-directed DNA polymerase VFG1512 Protein 9e-67 43