Gene Information

Name : ZPR_3414 (ZPR_3414)
Accession : YP_003585926.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Resistance
Product : copper-transporting ATPase, P-type (copB)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 3673899 - 3676001 bp
Length : 2103 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAATCACGAACACCACAATCACGATGAAATGGACCATTCTAAAATGGACCATTCGAAGATGAAACACAAAAAAGA
AGACCATTCTAAAATGAACCACAAAGGTGGAGACCATTCTGGCCACAATCCAGGGCACGGAGAACACGGGCACGACCATC
ATAAAATGATGATTGCCGATTTTAGAAAACGGTTTTGGGTAACCCTTGTACTTACTATTCCCATACTGTTCTTCTCGCCG
ATGATTCAGGACTTTTTTGGATATGAGTTTTTGCTTCCCGGAAATCCATATATCCTTTTTGCACTTTCCACAATCGTATA
TTTCTATGGTGGTTGGCCATTTTTAAAAGGATTCTGGTCTGAAATCAAAAAAGGTGCGCCAGGAATGATGACCTTGATTT
CTATGGCAATTTCTGTAGCTTATTTTTATAGCACCGCGACCGTATTTGGCTTAAGAGGCGAAGACTTTTTCTGGGAGCTA
TCAACACTTATAGCCATAATGTTGCTTGGTCATTGGATAGAAATGAAAAGTGTGTTAGGTGCGTCAAAAGCTTTACAGTT
ACTGGTAAGTATGATGCCTGCGGAAGCGCACAGGGTAAAAGGCGACATCATAGAAGACATCCCTCTTGAAGATTTACTAA
AGGATGATGTGATTTTGGTTAAACCAGGTGAAAAAGTTCCTGCTGATGGGATTATAGTAGACGGTTCAAGTTACCTGAAC
GAATCTATGCTTACAGGCGAATCCAAACCTGTAAAAAAAGATGAAAACGATAAGGTTATTGGTGGTTCGGTAAATGGTAA
CAGTACCTTAAAAGTAAAGGTTGAGCATACTGGAAAAGATAGCTATCTCAACAAGGTCATCAAAATGGTCGAAGAAGCGC
AAAAAACCAAATCAAAAATGCAAAACCTCTCGGATAGAGCTGCAAAATGGCTTACCTATATCGCATTAGGTATTGGTTTT
GGAACATTAGCGGTATGGCTGATTTTAGGCTTTCCATTTGTCTATGCTTTAGAAAGAATGGTTACCGTTATGGTCATTGC
TTGTCCACACGCATTAGGTCTTGCCATACCACTTGTGGTTGCTATTTCTACTGCTGTTTCAGCTCAAAACGGGTTATTAA
TTCGAAATAGGACAGCTTTTGAAGAATCCCGAAAAATATCAGCTTTATTGTTTGATAAAACGGGAACATTGACCAAAGGC
GATTTTGGCGTTACTCGAATTGAGTCTGTTAGCGAAACTTATTCATCTGAAGAAATTTTAAGGCTTTCGAGTGCATTGGA
ACAAAGTTCGGAACATCCTATCGCCGTAGGTATTATTAAAAAAGTCAAAGAAGATAATATGACCATCCCAAAGCCTGAAA
ACTTTAATGCAATTACAGGTAAAGGCGTTGAGGCCAATGTAGAAGGTAAGCAAGTAAAAGTGGTTAGTCCTGGTTTTTTA
AGGGATGAAAAAATCACTATTCCCGAAGACGCATACAGTGATGCCGCTGAAACAGTTGTTTTTGTCTTGATTGATGGAAA
ATTAGCTGGTTACATTGCTCTTGCCGATGAAATACGACCAGAATCTGCCGAAGCCATAAAAGTCTTTAAAAAGAATAACA
TTAAAGTTTTGATGGCAACAGGAGATAACGAAAAAACAGCCAAAGCTGTAAGTGATAAGCTTGGCTTGGATGGTTACTAT
GCTGAAGTGCTGCCACATCAAAAGGTAGAAATTGTAGAAAAGTTACAAAACAAAGGAGAATTTGTGGCTATGACTGGCGA
TGGTGTAAACGATGCGCCTGCACTTGCAAAAGCTGATGTTGGTATTGCCGTTGGTTCCGGAACAGATGTGGCTGCTGAAA
CTGCCGATATTATTTTGGTAAATAGCAATCCACAGGATATTGCCAATCTAATTCTATTCGGAAAAGCGACCTATAACAAA
ATGATTCAGAATCTAATCTGGGCTACGGGATATAATGTAGTGGCTATTCCTTTAGCAGCTGGCGTACTATATTCTTCAGG
CTTTGTTTTAGGACCTGCCGTTGGAGCTGTATTTATGAGTTTGAGCACCATTATAGTGGCCATTAATGCACAATTGTTAA
AAAGAAAAATCGGTAAAAAATAA

Protein sequence :
MENHEHHNHDEMDHSKMDHSKMKHKKEDHSKMNHKGGDHSGHNPGHGEHGHDHHKMMIADFRKRFWVTLVLTIPILFFSP
MIQDFFGYEFLLPGNPYILFALSTIVYFYGGWPFLKGFWSEIKKGAPGMMTLISMAISVAYFYSTATVFGLRGEDFFWEL
STLIAIMLLGHWIEMKSVLGASKALQLLVSMMPAEAHRVKGDIIEDIPLEDLLKDDVILVKPGEKVPADGIIVDGSSYLN
ESMLTGESKPVKKDENDKVIGGSVNGNSTLKVKVEHTGKDSYLNKVIKMVEEAQKTKSKMQNLSDRAAKWLTYIALGIGF
GTLAVWLILGFPFVYALERMVTVMVIACPHALGLAIPLVVAISTAVSAQNGLLIRNRTAFEESRKISALLFDKTGTLTKG
DFGVTRIESVSETYSSEEILRLSSALEQSSEHPIAVGIIKKVKEDNMTIPKPENFNAITGKGVEANVEGKQVKVVSPGFL
RDEKITIPEDAYSDAAETVVFVLIDGKLAGYIALADEIRPESAEAIKVFKKNNIKVLMATGDNEKTAKAVSDKLGLDGYY
AEVLPHQKVEIVEKLQNKGEFVAMTGDGVNDAPALAKADVGIAVGSGTDVAAETADIILVNSNPQDIANLILFGKATYNK
MIQNLIWATGYNVVAIPLAAGVLYSSGFVLGPAVGAVFMSLSTIIVAINAQLLKRKIGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-98 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_3414 YP_003585926.1 copper-transporting ATPase, P-type (copB) BAC0629 Protein 0.0 59
ZPR_3414 YP_003585926.1 copper-transporting ATPase, P-type (copB) BAC0079 Protein 9e-148 47
ZPR_3414 YP_003585926.1 copper-transporting ATPase, P-type (copB) BAC0383 Protein 1e-120 43