Gene Information

Name : ZPR_3059 (ZPR_3059)
Accession : YP_003585574.1
Strain : Zunongwangia profunda SMA-87
Genome accession: NC_014041
Putative virulence/resistance : Virulence
Product : DNA binding helix-turn helix protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 3320297 - 3320497 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAATACAATTAAAGTTGAGCGCGCCAAAAAGAATATGACTCAGGAGGATTTAGCAAAATTACTTGGGGTTTCCAG
ACAAACAGTAAATTCTATGGAGAAAAATAGATATGCGCCATCTACGATTCTTGCTTTAAAGCTTTCTAAAATTTTTGCTT
GTTCAGTAAATGAGATTTTTCAGCTGGACGATACAGATTAA

Protein sequence :
MKNTIKVERAKKNMTQEDLAKLLGVSRQTVNSMEKNRYAPSTILALKLSKIFACSVNEIFQLDDTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-10 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-09 48
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-09 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZPR_3059 YP_003585574.1 DNA binding helix-turn helix protein VFG2168 Protein 5e-10 48
ZPR_3059 YP_003585574.1 DNA binding helix-turn helix protein VFG2175 Protein 5e-10 48